215 homologs were found in PanDaTox collection
for query gene Mnod_3504 on replicon NC_011894
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011894  Mnod_3504  transcriptional regulator, MucR family  100 
 
 
131 aa  266  5.9999999999999995e-71  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011892  Mnod_8754  transcriptional regulator, MucR family  73.28 
 
 
143 aa  199  9.999999999999999e-51  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.17166  n/a   
 
 
-
 
NC_011894  Mnod_7194  transcriptional regulator, MucR family  77.87 
 
 
145 aa  196  6e-50  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0065  MucR family transcriptional regulator  68.42 
 
 
133 aa  196  9e-50  Methylobacterium sp. 4-46  Bacteria  normal  0.126654  normal  0.420331 
 
 
-
 
NC_011894  Mnod_7402  transcriptional regulator, MucR family  70.54 
 
 
133 aa  193  7e-49  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.169134  n/a   
 
 
-
 
NC_011894  Mnod_6541  transcriptional regulator, MucR family  71.43 
 
 
144 aa  192  1e-48  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6580  MucR family transcriptional regulator  69.77 
 
 
133 aa  190  7e-48  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0358165 
 
 
-
 
NC_011894  Mnod_7625  transcriptional regulator, MucR family  68.99 
 
 
166 aa  189  1e-47  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1559  transcriptional regulator, MucR family  67.97 
 
 
164 aa  188  2e-47  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.192096  n/a   
 
 
-
 
NC_011894  Mnod_6579  transcriptional regulator, MucR family  69.4 
 
 
166 aa  189  2e-47  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4973  transcriptional regulator, MucR family  67.97 
 
 
160 aa  187  5e-47  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_5932  MucR family transcriptional regulator  73.55 
 
 
145 aa  186  5.999999999999999e-47  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.54766 
 
 
-
 
NC_011894  Mnod_2999  transcriptional regulator, MucR family  71.65 
 
 
134 aa  186  7e-47  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3684  transcriptional regulator, MucR family  68.66 
 
 
162 aa  186  8e-47  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6603  MucR family transcriptional regulator  72.13 
 
 
171 aa  186  1e-46  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.108608 
 
 
-
 
NC_010511  M446_1890  MucR family transcriptional regulator  67.72 
 
 
143 aa  185  2e-46  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6899  MucR family transcriptional regulator  65.89 
 
 
164 aa  184  4e-46  Methylobacterium sp. 4-46  Bacteria  normal  0.106465  normal 
 
 
-
 
NC_010511  M446_6739  MucR family transcriptional regulator  64.89 
 
 
164 aa  183  8e-46  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.055135 
 
 
-
 
NC_011894  Mnod_1808  transcriptional regulator, MucR family  66.67 
 
 
160 aa  181  3e-45  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3346  MucR family transcriptional regulator  64.12 
 
 
163 aa  178  2e-44  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6742  MucR family transcriptional regulator  66.94 
 
 
143 aa  177  2.9999999999999997e-44  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0991744 
 
 
-
 
NC_010511  M446_1006  MucR family transcriptional regulator  63.64 
 
 
144 aa  177  2.9999999999999997e-44  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5073  transcriptional regulator, MucR family  70.59 
 
 
139 aa  177  5.999999999999999e-44  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_4730  MucR family transcriptional regulator  66.39 
 
 
145 aa  176  9e-44  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3011  transcriptional regulator, MucR family  65.6 
 
 
173 aa  176  1e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4253  transcriptional regulator, MucR family  72.03 
 
 
147 aa  175  2e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2620  transcriptional regulator, MucR family  68.91 
 
 
140 aa  175  2e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.297322  n/a   
 
 
-
 
NC_011894  Mnod_2484  transcriptional regulator, MucR family  70.83 
 
 
134 aa  175  2e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.281768  n/a   
 
 
-
 
NC_011894  Mnod_2091  transcriptional regulator, MucR family  68.07 
 
 
162 aa  175  2e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_5488  MucR family transcriptional regulator  67.77 
 
 
158 aa  172  9.999999999999999e-43  Methylobacterium sp. 4-46  Bacteria  normal  0.622801  normal  0.0617685 
 
 
-
 
NC_010511  M446_6298  MucR family transcriptional regulator  73.77 
 
 
142 aa  172  9.999999999999999e-43  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0539112 
 
 
-
 
NC_011894  Mnod_5626  transcriptional regulator, MucR family  72.93 
 
 
133 aa  172  1.9999999999999998e-42  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.63695  n/a   
 
 
-
 
NC_011894  Mnod_3845  transcriptional regulator, MucR family  69.75 
 
 
135 aa  171  2.9999999999999996e-42  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.581929  n/a   
 
 
-
 
NC_011894  Mnod_0549  transcriptional regulator, MucR family  62.5 
 
 
147 aa  170  5e-42  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.973698  n/a   
 
 
-
 
NC_011894  Mnod_3559  transcriptional regulator, MucR family  65.57 
 
 
144 aa  170  5e-42  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_5563  MucR family transcriptional regulator  61.6 
 
 
143 aa  169  1e-41  Methylobacterium sp. 4-46  Bacteria  normal  0.550782  normal 
 
 
-
 
NC_010511  M446_0608  MucR family transcriptional regulator  68.22 
 
 
166 aa  169  1e-41  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0460505 
 
 
-
 
NC_011894  Mnod_4087  transcriptional regulator, MucR family  67.23 
 
 
141 aa  167  3e-41  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.242362  n/a   
 
 
-
 
NC_011894  Mnod_2474  transcriptional regulator, MucR family  60.9 
 
 
168 aa  167  4e-41  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011887  Mnod_8232  transcriptional regulator, MucR family  66.12 
 
 
150 aa  167  6e-41  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0643273  n/a   
 
 
-
 
NC_010511  M446_4944  MucR family transcriptional regulator  70.83 
 
 
158 aa  163  8e-40  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_2834  ROSMUCR transcriptional regulator  64.23 
 
 
162 aa  162  1.0000000000000001e-39  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3060  transcriptional regulator, MucR family  64.23 
 
 
162 aa  162  1.0000000000000001e-39  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_4116  MucR family transcriptional regulator  63.71 
 
 
140 aa  157  4e-38  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.147804 
 
 
-
 
NC_009720  Xaut_1838  MucR family transcriptional regulator  60 
 
 
155 aa  157  5e-38  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0743894  normal  0.315346 
 
 
-
 
NC_010505  Mrad2831_0075  MucR family transcriptional regulator  55.88 
 
 
166 aa  157  6e-38  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011893  Mnod_8789  transcriptional regulator, MucR family  61.16 
 
 
147 aa  155  1e-37  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.292559  n/a   
 
 
-
 
NC_010511  M446_4097  MucR family transcriptional regulator  60.66 
 
 
143 aa  156  1e-37  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.812633 
 
 
-
 
NC_010725  Mpop_2952  transcriptional regulator, MucR family  61.31 
 
 
160 aa  155  2e-37  Methylobacterium populi BJ001  Bacteria  normal  0.324392  normal 
 
 
-
 
NC_010511  M446_0587  MucR family transcriptional regulator  61.34 
 
 
157 aa  155  2e-37  Methylobacterium sp. 4-46  Bacteria  normal  0.0109398  hitchhiker  0.00472777 
 
 
-
 
NC_010505  Mrad2831_4669  MucR family transcriptional regulator  56.82 
 
 
169 aa  154  4e-37  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3912  MucR family transcriptional regulator  57.25 
 
 
137 aa  153  6e-37  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.913011  normal  0.1317 
 
 
-
 
NC_010511  M446_4422  MucR family transcriptional regulator  60 
 
 
145 aa  154  6e-37  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.705801 
 
 
-
 
NC_007958  RPD_1940  MucR family transcriptional regulator  56.72 
 
 
138 aa  153  8e-37  Rhodopseudomonas palustris BisB5  Bacteria  decreased coverage  0.00262472  normal  0.275978 
 
 
-
 
NC_011894  Mnod_2100  transcriptional regulator, MucR family  65.65 
 
 
166 aa  152  1e-36  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2057  transcriptional regulator, MucR family  56.72 
 
 
138 aa  152  1e-36  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6164  MucR family transcriptional regulator  60.48 
 
 
174 aa  151  2e-36  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2468  transcriptional regulator, MucR family  56.39 
 
 
165 aa  151  2e-36  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3042  MucR family transcriptional regulator  57.14 
 
 
138 aa  150  4e-36  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_0124  transcriptional regulator, MucR family  57.14 
 
 
137 aa  149  1e-35  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.376819  n/a   
 
 
-
 
NC_011892  Mnod_8753  transcriptional regulator, MucR family  59.2 
 
 
175 aa  148  2e-35  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.286217  n/a   
 
 
-
 
NC_011666  Msil_1673  transcriptional regulator, MucR family  55.22 
 
 
137 aa  148  2e-35  Methylocella silvestris BL2  Bacteria  n/a    normal  0.233018 
 
 
-
 
NC_007964  Nham_2627  MucR family transcriptional regulator  54.89 
 
 
137 aa  148  3e-35  Nitrobacter hamburgensis X14  Bacteria  normal  0.337964  n/a   
 
 
-
 
NC_011892  Mnod_8284  transcriptional regulator, MucR family  58.82 
 
 
143 aa  147  5e-35  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.647815  n/a   
 
 
-
 
NC_010511  M446_1153  MucR family transcriptional regulator  58.87 
 
 
174 aa  147  5e-35  Methylobacterium sp. 4-46  Bacteria  normal  0.877039  normal 
 
 
-
 
NC_007406  Nwi_2227  ROSMUCR transcriptional regulator  53.38 
 
 
137 aa  147  7e-35  Nitrobacter winogradskyi Nb-255  Bacteria  decreased coverage  0.0000658566  normal 
 
 
-
 
NC_007778  RPB_3519  MucR family transcriptional regulator  54.48 
 
 
139 aa  146  7e-35  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.409098  normal  0.722255 
 
 
-
 
NC_009720  Xaut_2239  MucR family transcriptional regulator  56.15 
 
 
154 aa  146  1.0000000000000001e-34  Xanthobacter autotrophicus Py2  Bacteria  normal  0.247755  normal  0.0103363 
 
 
-
 
NC_009720  Xaut_2842  MucR family transcriptional regulator  57.36 
 
 
139 aa  146  1.0000000000000001e-34  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.840232 
 
 
-
 
NC_011894  Mnod_4660  transcriptional regulator, MucR family  55.46 
 
 
139 aa  145  2.0000000000000003e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.20016  n/a   
 
 
-
 
NC_011894  Mnod_4157  transcriptional regulator, MucR family  55.38 
 
 
141 aa  145  2.0000000000000003e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.157923  n/a   
 
 
-
 
NC_010725  Mpop_4977  transcriptional regulator, MucR family  55.04 
 
 
178 aa  145  3e-34  Methylobacterium populi BJ001  Bacteria  normal  0.443589  normal  0.0364251 
 
 
-
 
NC_011894  Mnod_5627  transcriptional regulator, MucR family  55.22 
 
 
174 aa  143  6e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.698408  n/a   
 
 
-
 
NC_010517  Mrad2831_6410  MucR family transcriptional regulator  54.55 
 
 
172 aa  143  8.000000000000001e-34  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    normal 
 
 
-
 
NC_010514  Mrad2831_6380  MucR family transcriptional regulator  54.55 
 
 
172 aa  143  8.000000000000001e-34  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    n/a   
 
 
-
 
NC_007643  Rru_A3766  MucR family transcriptional regulator  59.02 
 
 
140 aa  142  1e-33  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_6343  transcriptional regulator, MucR family  55.38 
 
 
189 aa  142  2e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_1642  MucR family transcriptional regulator  55.22 
 
 
138 aa  142  2e-33  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.326969  normal  0.30355 
 
 
-
 
NC_011757  Mchl_4927  transcriptional regulator, MucR family  53.97 
 
 
177 aa  141  3e-33  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.971725 
 
 
-
 
NC_010725  Mpop_0503  transcriptional regulator, MucR family  55.22 
 
 
145 aa  141  3e-33  Methylobacterium populi BJ001  Bacteria  normal  normal  0.0293653 
 
 
-
 
NC_010172  Mext_4463  ROSMUCR transcriptional regulator  52.94 
 
 
177 aa  141  3e-33  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_1029  MucR family transcriptional regulator  48.85 
 
 
146 aa  141  3e-33  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_1774  MucR family transcriptional regulator  57.89 
 
 
138 aa  141  4e-33  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.257701  normal  0.0107118 
 
 
-
 
NC_011894  Mnod_3505  transcriptional regulator, MucR family  52.99 
 
 
174 aa  140  4e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_3787  ROSMUCR transcriptional regulator  50.76 
 
 
140 aa  141  4e-33  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_1889  MucR family transcriptional regulator  59.5 
 
 
156 aa  141  4e-33  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011887  Mnod_7826  transcriptional regulator, MucR family  52.99 
 
 
174 aa  140  5e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_1517  MucR family transcriptional regulator  51.67 
 
 
160 aa  140  5e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.400145  normal  0.0460522 
 
 
-
 
NC_011894  Mnod_0068  transcriptional regulator, MucR family  56.56 
 
 
174 aa  140  6e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011367  Gdia_3574  transcriptional regulator, MucR family  56.25 
 
 
185 aa  139  9e-33  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.0283517  n/a   
 
 
-
 
NC_011365  Gdia_3197  transcriptional regulator, MucR family  55.28 
 
 
158 aa  139  9.999999999999999e-33  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.345502  normal 
 
 
-
 
NC_009621  Smed_6025  MucR family transcriptional regulator  54.14 
 
 
148 aa  139  9.999999999999999e-33  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0116577 
 
 
-
 
NC_009621  Smed_6057  MucR family transcriptional regulator  53.79 
 
 
151 aa  139  9.999999999999999e-33  Sinorhizobium medicae WSM419  Bacteria  normal  0.320123  normal 
 
 
-
 
NC_010172  Mext_4474  ROSMUCR transcriptional regulator  50.4 
 
 
176 aa  139  9.999999999999999e-33  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4324  MucR family transcriptional regulator  51.85 
 
 
179 aa  139  9.999999999999999e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0666853 
 
 
-
 
NC_011757  Mchl_4938  transcriptional regulator, MucR family  50.4 
 
 
176 aa  139  9.999999999999999e-33  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.686756  normal  0.493177 
 
 
-
 
NC_009621  Smed_5993  MucR family transcriptional regulator  53.79 
 
 
149 aa  139  1.9999999999999998e-32  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0950336 
 
 
-
 
NC_010505  Mrad2831_4896  MucR family transcriptional regulator  51.59 
 
 
180 aa  139  1.9999999999999998e-32  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.127609  hitchhiker  0.00352911 
 
 
-
 
NC_010505  Mrad2831_5176  MucR family transcriptional regulator  53.12 
 
 
190 aa  138  1.9999999999999998e-32  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2365  transcriptional regulator, MucR family  53.44 
 
 
176 aa  138  1.9999999999999998e-32  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
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