216 homologs were found in PanDaTox collection
for query gene Mnod_6541 on replicon NC_011894
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011894  Mnod_6541  transcriptional regulator, MucR family  100 
 
 
144 aa  290  6e-78  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_5932  MucR family transcriptional regulator  91.67 
 
 
145 aa  269  7e-72  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.54766 
 
 
-
 
NC_011894  Mnod_6579  transcriptional regulator, MucR family  71.33 
 
 
166 aa  206  9e-53  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3684  transcriptional regulator, MucR family  71.21 
 
 
162 aa  193  6e-49  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6742  MucR family transcriptional regulator  68.31 
 
 
143 aa  192  1e-48  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0991744 
 
 
-
 
NC_010511  M446_1890  MucR family transcriptional regulator  67.63 
 
 
143 aa  191  2e-48  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6603  MucR family transcriptional regulator  66.43 
 
 
171 aa  190  5e-48  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.108608 
 
 
-
 
NC_011894  Mnod_7402  transcriptional regulator, MucR family  71.54 
 
 
133 aa  190  5e-48  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.169134  n/a   
 
 
-
 
NC_011892  Mnod_8754  transcriptional regulator, MucR family  71.97 
 
 
143 aa  190  6e-48  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.17166  n/a   
 
 
-
 
NC_011894  Mnod_7625  transcriptional regulator, MucR family  70.31 
 
 
166 aa  188  2e-47  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1808  transcriptional regulator, MucR family  68.94 
 
 
160 aa  188  2e-47  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4973  transcriptional regulator, MucR family  66.67 
 
 
160 aa  187  5e-47  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6899  MucR family transcriptional regulator  73.33 
 
 
164 aa  186  8e-47  Methylobacterium sp. 4-46  Bacteria  normal  0.106465  normal 
 
 
-
 
NC_011894  Mnod_2091  transcriptional regulator, MucR family  70.16 
 
 
162 aa  186  1e-46  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2999  transcriptional regulator, MucR family  73.17 
 
 
134 aa  186  1e-46  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6580  MucR family transcriptional regulator  69.23 
 
 
133 aa  185  2e-46  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0358165 
 
 
-
 
NC_010511  M446_0065  MucR family transcriptional regulator  66.92 
 
 
133 aa  185  2e-46  Methylobacterium sp. 4-46  Bacteria  normal  0.126654  normal  0.420331 
 
 
-
 
NC_010511  M446_5563  MucR family transcriptional regulator  65.15 
 
 
143 aa  180  5.0000000000000004e-45  Methylobacterium sp. 4-46  Bacteria  normal  0.550782  normal 
 
 
-
 
NC_011894  Mnod_7194  transcriptional regulator, MucR family  68.25 
 
 
145 aa  180  5.0000000000000004e-45  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3346  MucR family transcriptional regulator  64.79 
 
 
163 aa  180  6e-45  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2484  transcriptional regulator, MucR family  68.99 
 
 
134 aa  179  1e-44  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.281768  n/a   
 
 
-
 
NC_010511  M446_1006  MucR family transcriptional regulator  64.62 
 
 
144 aa  179  1e-44  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_0549  transcriptional regulator, MucR family  60.87 
 
 
147 aa  178  2e-44  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.973698  n/a   
 
 
-
 
NC_011894  Mnod_3011  transcriptional regulator, MucR family  62.41 
 
 
173 aa  179  2e-44  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3845  transcriptional regulator, MucR family  70.31 
 
 
135 aa  177  4e-44  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.581929  n/a   
 
 
-
 
NC_010511  M446_6739  MucR family transcriptional regulator  66.41 
 
 
164 aa  177  4.999999999999999e-44  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.055135 
 
 
-
 
NC_010511  M446_5488  MucR family transcriptional regulator  66.17 
 
 
158 aa  177  4.999999999999999e-44  Methylobacterium sp. 4-46  Bacteria  normal  0.622801  normal  0.0617685 
 
 
-
 
NC_011894  Mnod_1559  transcriptional regulator, MucR family  69.75 
 
 
164 aa  177  4.999999999999999e-44  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.192096  n/a   
 
 
-
 
NC_011894  Mnod_4253  transcriptional regulator, MucR family  67.72 
 
 
147 aa  174  5e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_5073  transcriptional regulator, MucR family  66.93 
 
 
139 aa  173  6e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2620  transcriptional regulator, MucR family  66.15 
 
 
140 aa  171  2.9999999999999996e-42  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.297322  n/a   
 
 
-
 
NC_010511  M446_4944  MucR family transcriptional regulator  65 
 
 
158 aa  170  6.999999999999999e-42  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3559  transcriptional regulator, MucR family  63.91 
 
 
144 aa  167  4e-41  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_4730  MucR family transcriptional regulator  64.62 
 
 
145 aa  164  2.9999999999999998e-40  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011893  Mnod_8789  transcriptional regulator, MucR family  58.7 
 
 
147 aa  164  4e-40  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.292559  n/a   
 
 
-
 
NC_011894  Mnod_3504  transcriptional regulator, MucR family  71.43 
 
 
131 aa  164  5e-40  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4087  transcriptional regulator, MucR family  60.69 
 
 
141 aa  164  5e-40  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.242362  n/a   
 
 
-
 
NC_011887  Mnod_8232  transcriptional regulator, MucR family  63.91 
 
 
150 aa  163  5.9999999999999996e-40  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0643273  n/a   
 
 
-
 
NC_010511  M446_4422  MucR family transcriptional regulator  66.67 
 
 
145 aa  163  5.9999999999999996e-40  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.705801 
 
 
-
 
NC_010172  Mext_0432  ROSMUCR transcriptional regulator  62.96 
 
 
145 aa  160  4.0000000000000004e-39  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0466  transcriptional regulator, MucR family  62.96 
 
 
145 aa  160  4.0000000000000004e-39  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.138143 
 
 
-
 
NC_011894  Mnod_2474  transcriptional regulator, MucR family  62.4 
 
 
168 aa  159  1e-38  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_0503  transcriptional regulator, MucR family  62.22 
 
 
145 aa  159  1e-38  Methylobacterium populi BJ001  Bacteria  normal  normal  0.0293653 
 
 
-
 
NC_010511  M446_6298  MucR family transcriptional regulator  68.6 
 
 
142 aa  158  3e-38  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0539112 
 
 
-
 
NC_009720  Xaut_1838  MucR family transcriptional regulator  56.06 
 
 
155 aa  158  3e-38  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0743894  normal  0.315346 
 
 
-
 
NC_010511  M446_0608  MucR family transcriptional regulator  70.59 
 
 
166 aa  158  3e-38  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0460505 
 
 
-
 
NC_010505  Mrad2831_4669  MucR family transcriptional regulator  60.9 
 
 
169 aa  156  9e-38  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5626  transcriptional regulator, MucR family  71.07 
 
 
133 aa  155  2e-37  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.63695  n/a   
 
 
-
 
NC_009720  Xaut_2239  MucR family transcriptional regulator  55.48 
 
 
154 aa  155  2e-37  Xanthobacter autotrophicus Py2  Bacteria  normal  0.247755  normal  0.0103363 
 
 
-
 
NC_007958  RPD_1940  MucR family transcriptional regulator  61.29 
 
 
138 aa  152  2e-36  Rhodopseudomonas palustris BisB5  Bacteria  decreased coverage  0.00262472  normal  0.275978 
 
 
-
 
NC_011894  Mnod_4157  transcriptional regulator, MucR family  61.67 
 
 
141 aa  151  2.9999999999999998e-36  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.157923  n/a   
 
 
-
 
NC_010505  Mrad2831_3912  MucR family transcriptional regulator  56.8 
 
 
137 aa  151  2.9999999999999998e-36  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.913011  normal  0.1317 
 
 
-
 
NC_011894  Mnod_0124  transcriptional regulator, MucR family  56.15 
 
 
137 aa  150  4e-36  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.376819  n/a   
 
 
-
 
NC_007778  RPB_3519  MucR family transcriptional regulator  58.65 
 
 
139 aa  149  1e-35  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.409098  normal  0.722255 
 
 
-
 
NC_010172  Mext_2834  ROSMUCR transcriptional regulator  57.66 
 
 
162 aa  149  1e-35  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_3197  transcriptional regulator, MucR family  56.3 
 
 
158 aa  149  1e-35  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.345502  normal 
 
 
-
 
NC_011757  Mchl_3060  transcriptional regulator, MucR family  57.66 
 
 
162 aa  149  1e-35  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_4116  MucR family transcriptional regulator  67.5 
 
 
140 aa  149  1e-35  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.147804 
 
 
-
 
NC_011894  Mnod_2100  transcriptional regulator, MucR family  61.27 
 
 
166 aa  148  2e-35  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6164  MucR family transcriptional regulator  57.24 
 
 
174 aa  147  3e-35  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3042  MucR family transcriptional regulator  57.72 
 
 
138 aa  147  6e-35  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_4097  MucR family transcriptional regulator  57.94 
 
 
143 aa  147  6e-35  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.812633 
 
 
-
 
NC_010725  Mpop_2952  transcriptional regulator, MucR family  57.66 
 
 
160 aa  146  8e-35  Methylobacterium populi BJ001  Bacteria  normal  0.324392  normal 
 
 
-
 
NC_011894  Mnod_6343  transcriptional regulator, MucR family  57.58 
 
 
189 aa  146  9e-35  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_4977  transcriptional regulator, MucR family  55.56 
 
 
178 aa  146  1.0000000000000001e-34  Methylobacterium populi BJ001  Bacteria  normal  0.443589  normal  0.0364251 
 
 
-
 
NC_011894  Mnod_2468  transcriptional regulator, MucR family  57.6 
 
 
165 aa  146  1.0000000000000001e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_1029  MucR family transcriptional regulator  53.79 
 
 
146 aa  145  1.0000000000000001e-34  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_2907  MucR family transcriptional regulator  51.59 
 
 
168 aa  145  2.0000000000000003e-34  Parvibaculum lavamentivorans DS-1  Bacteria  hitchhiker  0.000783071  hitchhiker  0.00150046 
 
 
-
 
NC_011757  Mchl_4927  transcriptional regulator, MucR family  55.56 
 
 
177 aa  145  2.0000000000000003e-34  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.971725 
 
 
-
 
NC_010505  Mrad2831_0075  MucR family transcriptional regulator  55.88 
 
 
166 aa  145  2.0000000000000003e-34  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_5315  transcriptional regulator, MucR family  55.56 
 
 
171 aa  145  2.0000000000000003e-34  Methylobacterium populi BJ001  Bacteria  normal  0.160957  normal  0.979168 
 
 
-
 
NC_010172  Mext_4463  ROSMUCR transcriptional regulator  55.56 
 
 
177 aa  144  3e-34  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2057  transcriptional regulator, MucR family  59.2 
 
 
138 aa  144  4.0000000000000006e-34  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_4896  MucR family transcriptional regulator  56.06 
 
 
180 aa  144  4.0000000000000006e-34  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.127609  hitchhiker  0.00352911 
 
 
-
 
NC_009720  Xaut_2842  MucR family transcriptional regulator  55.04 
 
 
139 aa  143  9e-34  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.840232 
 
 
-
 
NC_011757  Mchl_4938  transcriptional regulator, MucR family  51.11 
 
 
176 aa  143  1e-33  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.686756  normal  0.493177 
 
 
-
 
NC_010725  Mpop_4988  transcriptional regulator, MucR family  51.85 
 
 
177 aa  142  1e-33  Methylobacterium populi BJ001  Bacteria  normal  0.103901  normal  0.173335 
 
 
-
 
NC_010172  Mext_4474  ROSMUCR transcriptional regulator  51.11 
 
 
176 aa  143  1e-33  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_4660  transcriptional regulator, MucR family  55.74 
 
 
139 aa  142  1e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.20016  n/a   
 
 
-
 
NC_011892  Mnod_8753  transcriptional regulator, MucR family  55.56 
 
 
175 aa  141  2e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.286217  n/a   
 
 
-
 
NC_011894  Mnod_3505  transcriptional regulator, MucR family  51.63 
 
 
174 aa  141  2e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_2384  MucR family transcriptional regulator  54.68 
 
 
137 aa  142  2e-33  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5627  transcriptional regulator, MucR family  52.29 
 
 
174 aa  141  3e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.698408  n/a   
 
 
-
 
NC_011757  Mchl_5240  transcriptional regulator, MucR family  56.91 
 
 
175 aa  141  3e-33  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.672182 
 
 
-
 
NC_011894  Mnod_0068  transcriptional regulator, MucR family  54.35 
 
 
174 aa  140  4e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_1673  transcriptional regulator, MucR family  56.91 
 
 
137 aa  141  4e-33  Methylocella silvestris BL2  Bacteria  n/a    normal  0.233018 
 
 
-
 
NC_010172  Mext_4773  ROSMUCR transcriptional regulator  56.91 
 
 
175 aa  140  4e-33  Methylobacterium extorquens PA1  Bacteria  normal  0.494992  normal 
 
 
-
 
NC_010517  Mrad2831_6410  MucR family transcriptional regulator  57.69 
 
 
172 aa  140  5e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    normal 
 
 
-
 
NC_010514  Mrad2831_6380  MucR family transcriptional regulator  57.69 
 
 
172 aa  140  5e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    n/a   
 
 
-
 
NC_010511  M446_0587  MucR family transcriptional regulator  57.14 
 
 
157 aa  140  5e-33  Methylobacterium sp. 4-46  Bacteria  normal  0.0109398  hitchhiker  0.00472777 
 
 
-
 
NC_011887  Mnod_8109  transcriptional regulator, MucR family  57.38 
 
 
173 aa  140  6e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A3766  MucR family transcriptional regulator  54.07 
 
 
140 aa  139  9.999999999999999e-33  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_0871  MucR family transcriptional regulator  51.85 
 
 
156 aa  139  9.999999999999999e-33  Chelativorans sp. BNC1  Bacteria  normal  0.0229033  n/a   
 
 
-
 
NC_011367  Gdia_3574  transcriptional regulator, MucR family  54.81 
 
 
185 aa  139  9.999999999999999e-33  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.0283517  n/a   
 
 
-
 
NC_010511  M446_5185  MucR family transcriptional regulator  58.33 
 
 
185 aa  139  9.999999999999999e-33  Methylobacterium sp. 4-46  Bacteria  normal  0.238338  normal  0.0253848 
 
 
-
 
NC_010505  Mrad2831_4324  MucR family transcriptional regulator  56.91 
 
 
179 aa  139  9.999999999999999e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0666853 
 
 
-
 
NC_007964  Nham_2627  MucR family transcriptional regulator  51.91 
 
 
137 aa  138  1.9999999999999998e-32  Nitrobacter hamburgensis X14  Bacteria  normal  0.337964  n/a   
 
 
-
 
NC_011894  Mnod_3902  transcriptional regulator, MucR family  55.28 
 
 
172 aa  137  3.9999999999999997e-32  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_1153  MucR family transcriptional regulator  57.72 
 
 
174 aa  137  4.999999999999999e-32  Methylobacterium sp. 4-46  Bacteria  normal  0.877039  normal 
 
 
-
 
NC_007406  Nwi_2227  ROSMUCR transcriptional regulator  52.85 
 
 
137 aa  136  8.999999999999999e-32  Nitrobacter winogradskyi Nb-255  Bacteria  decreased coverage  0.0000658566  normal 
 
 
-
 
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