Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1940 |
Symbol | |
ID | 4022422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2179307 |
End bp | 2179723 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637962133 |
Product | MucR family transcriptional regulator |
Protein accession | YP_569076 |
Protein GI | 91976417 |
COG category | [K] Transcription |
COG ID | [COG4957] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00262472 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.275978 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACC CCGCGGGCAA GAGCTTCATC GAACTGACCG CGACCATCGT CTCCGCTTAT GTCAGCAACA ATCCGACGCC GGCGGGCGAG ATTCCCGGCC TGATCGGGCA GGTGCACGCC GCTTTGCAGC GGCTGTCGAG CGGCCGCCCC GAGACTCCGG CGCTGGAGCC GGCGAAGCCC GCGGTTCCGC TGAAGAAGTC GATGACGCCG GAATATTTGA TCTGCCTGGA GGACGGCAAA CGCTTCAAAT CGCTGAAGCG GCATCTGCGC ACCCAATACA AGATGACCCC GGAGCAATAC CGCGAGAAAT GGGGACTGCC GGCCGACTAC CCGATGGTCG CGCCGAACTA CGCCGTGGAG CGCTCGCAGC TCGCCAAGAA AATGGGGTTG GGGCAGCAGC GCCGGCGGCG GAAATAG
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Protein sequence | MSDPAGKSFI ELTATIVSAY VSNNPTPAGE IPGLIGQVHA ALQRLSSGRP ETPALEPAKP AVPLKKSMTP EYLICLEDGK RFKSLKRHLR TQYKMTPEQY REKWGLPADY PMVAPNYAVE RSQLAKKMGL GQQRRRRK
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