Gene RPB_3519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3519 
Symbol 
ID3911321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4027516 
End bp4027935 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content67% 
IMG OID637885421 
ProductMucR family transcriptional regulator 
Protein accessionYP_487125 
Protein GI86750629 
COG category[K] Transcription 
COG ID[COG4957] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.409098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.722255 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG CCGCGGGCAA GAGCCTGATC GAACTGACCG CGACCATCGT GTCGGCCTAT 
GTCAGCAACA ATCCGACGCC GGCGGGCGAG GTCCCGAGCC TGCTCGGGCA GGTGCACGCC
GCCCTGCAGC GGCTGTCGAG CGGCCGCGCC GAAGCGCCGG CGCTGGAGCC GGCCAAGCCG
GCGGTTCCGC TGAAGAAGTC GATGACGCCG GAATATCTGA TCTGCCTCGA GGACGGCAAA
CGCTTCAAAT CGCTGAAGCG GCATCTGCGC ACCCAGTACA AGATGACCCC CGAGCAATAT
CGCGAGAAAT GGGGCCTGCC GTCGGACTAC CCGATGGTCG CGCCGAATTA CGCGGTCGAG
CGCTCGCAAC TCGCCAAGAA GATGGGCCTC GGCCAGCAGC GCCGCCGGCG CAGCAAGTAG
 
Protein sequence
MSDAAGKSLI ELTATIVSAY VSNNPTPAGE VPSLLGQVHA ALQRLSSGRA EAPALEPAKP 
AVPLKKSMTP EYLICLEDGK RFKSLKRHLR TQYKMTPEQY REKWGLPSDY PMVAPNYAVE
RSQLAKKMGL GQQRRRRSK