Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2907 |
Symbol | |
ID | 5454341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3108206 |
End bp | 3108712 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640878489 |
Product | MucR family transcriptional regulator |
Protein accession | YP_001414171 |
Protein GI | 154253347 |
COG category | [K] Transcription |
COG ID | [COG4957] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.000783071 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.00150046 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGTTTT TGCACCCCCG CGGAGCGGAG GCGTCACCCC CAGTAAGGCA ATTTGTCGGA ATGAATGAGA CTAGGTCTTC AGTGTCCGGT GACACGACGG AAATACTTCG CCTCGCAACT GAAATAGTTG CGGCTTATGT AAGCAACAAC GCGATCGCAG CGAATGACAT TGCCGGGATG ATCCGCGCCG TTCATTCAAC GCTTTCAGAT CTCGGTCAAG GCGTAAGTGC CAAGGAAGCC GACCTTGCGC CCGCGGTCCC GGTCAAGAAA TCTGTCACGT CGGACTACAT TGTCTGCCTG GAAGACGGCA AGAAGCTCAA AATGCTGAAG CGCTATCTGC GCTCGCAATT TGGCCTTACG CCGGAGGAAT ACAGGGCTCG CTGGAACCTG CCACACGACT ACCCAATGGT AGCGCCGAAC TACGCGGCCC AGCGTTCCAA ACTGGCGAAG CAGATCGGTC TCGGACGGGT CGGCACGGCG CCAGCACGCG GTCGCAAGAA GAAGTAA
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Protein sequence | MAFLHPRGAE ASPPVRQFVG MNETRSSVSG DTTEILRLAT EIVAAYVSNN AIAANDIAGM IRAVHSTLSD LGQGVSAKEA DLAPAVPVKK SVTSDYIVCL EDGKKLKMLK RYLRSQFGLT PEEYRARWNL PHDYPMVAPN YAAQRSKLAK QIGLGRVGTA PARGRKKK
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