Gene Plav_2907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2907 
Symbol 
ID5454341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3108206 
End bp3108712 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content57% 
IMG OID640878489 
ProductMucR family transcriptional regulator 
Protein accessionYP_001414171 
Protein GI154253347 
COG category[K] Transcription 
COG ID[COG4957] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.000783071 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.00150046 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGTTTT TGCACCCCCG CGGAGCGGAG GCGTCACCCC CAGTAAGGCA ATTTGTCGGA 
ATGAATGAGA CTAGGTCTTC AGTGTCCGGT GACACGACGG AAATACTTCG CCTCGCAACT
GAAATAGTTG CGGCTTATGT AAGCAACAAC GCGATCGCAG CGAATGACAT TGCCGGGATG
ATCCGCGCCG TTCATTCAAC GCTTTCAGAT CTCGGTCAAG GCGTAAGTGC CAAGGAAGCC
GACCTTGCGC CCGCGGTCCC GGTCAAGAAA TCTGTCACGT CGGACTACAT TGTCTGCCTG
GAAGACGGCA AGAAGCTCAA AATGCTGAAG CGCTATCTGC GCTCGCAATT TGGCCTTACG
CCGGAGGAAT ACAGGGCTCG CTGGAACCTG CCACACGACT ACCCAATGGT AGCGCCGAAC
TACGCGGCCC AGCGTTCCAA ACTGGCGAAG CAGATCGGTC TCGGACGGGT CGGCACGGCG
CCAGCACGCG GTCGCAAGAA GAAGTAA
 
Protein sequence
MAFLHPRGAE ASPPVRQFVG MNETRSSVSG DTTEILRLAT EIVAAYVSNN AIAANDIAGM 
IRAVHSTLSD LGQGVSAKEA DLAPAVPVKK SVTSDYIVCL EDGKKLKMLK RYLRSQFGLT
PEEYRARWNL PHDYPMVAPN YAAQRSKLAK QIGLGRVGTA PARGRKKK