Gene Swit_1802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1802 
Symbol 
ID5200736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2015608 
End bp2016054 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content63% 
IMG OID640581348 
ProductMucR family transcriptional regulator 
Protein accessionYP_001262301 
Protein GI148554719 
COG category[K] Transcription 
COG ID[COG4957] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.333546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACG AAATCATGTT GGAACTGACC GCGGATATTG TCGCGTCCCA TCTTACCAAC 
AACAAGGTCG CCGTCGGCGA CGTCGCCGAA CTCATCCGGA ACGTTCATGC GACGCTGACG
AGCCTGGGCC AGCCGGCCGC GGAACCCGTG GCGGAACTCA AGCCCGCGGT CCCCATCCGC
TCCTCGATCA AGCCAGATTA TCTGGTCAGC CTGGAATCGG GCAAGAAGAT GAAGATGCTC
AAGCGCTATC TTCAGACCAA TTACGGCATG TCGCCCGACG ACTATCGCAA GAAATGGGGC
CTGGCGGCCG ACTATCCGAT GGTGGCCCCG AACTATGCCG AGACGCGCCG CAACCTCGCG
GTGAAGAGCG GCCTCGGCCG CAAGAAGGAA GTCGCTCCGC CGCCGCCGAA GGCGCGCAAG
CCGCGCAAGA CCACGCCGAA GGCCTGA
 
Protein sequence
MADEIMLELT ADIVASHLTN NKVAVGDVAE LIRNVHATLT SLGQPAAEPV AELKPAVPIR 
SSIKPDYLVS LESGKKMKML KRYLQTNYGM SPDDYRKKWG LAADYPMVAP NYAETRRNLA
VKSGLGRKKE VAPPPPKARK PRKTTPKA