218 homologs were found in PanDaTox collection
for query gene Mnod_7625 on replicon NC_011894
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011894  Mnod_7625  transcriptional regulator, MucR family  100 
 
 
166 aa  328  2e-89  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6899  MucR family transcriptional regulator  84.15 
 
 
164 aa  258  3e-68  Methylobacterium sp. 4-46  Bacteria  normal  0.106465  normal 
 
 
-
 
NC_010511  M446_3346  MucR family transcriptional regulator  77.78 
 
 
163 aa  249  1e-65  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6739  MucR family transcriptional regulator  82.32 
 
 
164 aa  245  2e-64  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.055135 
 
 
-
 
NC_011892  Mnod_8754  transcriptional regulator, MucR family  81.69 
 
 
143 aa  238  2e-62  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.17166  n/a   
 
 
-
 
NC_011894  Mnod_3011  transcriptional regulator, MucR family  66.67 
 
 
173 aa  216  1e-55  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_6579  transcriptional regulator, MucR family  72.37 
 
 
166 aa  212  1.9999999999999998e-54  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011892  Mnod_8753  transcriptional regulator, MucR family  64.57 
 
 
175 aa  209  1e-53  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.286217  n/a   
 
 
-
 
NC_011887  Mnod_7826  transcriptional regulator, MucR family  70 
 
 
174 aa  206  1e-52  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3505  transcriptional regulator, MucR family  66.04 
 
 
174 aa  202  2e-51  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_5627  transcriptional regulator, MucR family  66.67 
 
 
174 aa  202  2e-51  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.698408  n/a   
 
 
-
 
NC_010511  M446_0608  MucR family transcriptional regulator  68.94 
 
 
166 aa  200  9e-51  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0460505 
 
 
-
 
NC_011894  Mnod_3684  transcriptional regulator, MucR family  66.87 
 
 
162 aa  199  1.9999999999999998e-50  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6603  MucR family transcriptional regulator  66.04 
 
 
171 aa  193  7e-49  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.108608 
 
 
-
 
NC_010511  M446_5932  MucR family transcriptional regulator  75.83 
 
 
145 aa  191  4e-48  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.54766 
 
 
-
 
NC_010511  M446_1006  MucR family transcriptional regulator  67.16 
 
 
144 aa  191  4e-48  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_6541  transcriptional regulator, MucR family  70.31 
 
 
144 aa  189  2e-47  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2999  transcriptional regulator, MucR family  72.87 
 
 
134 aa  189  2e-47  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1559  transcriptional regulator, MucR family  67.68 
 
 
164 aa  189  2e-47  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.192096  n/a   
 
 
-
 
NC_010511  M446_6164  MucR family transcriptional regulator  61.25 
 
 
174 aa  188  2.9999999999999997e-47  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0065  MucR family transcriptional regulator  69.92 
 
 
133 aa  187  5e-47  Methylobacterium sp. 4-46  Bacteria  normal  0.126654  normal  0.420331 
 
 
-
 
NC_010511  M446_1153  MucR family transcriptional regulator  60.62 
 
 
174 aa  184  5e-46  Methylobacterium sp. 4-46  Bacteria  normal  0.877039  normal 
 
 
-
 
NC_011894  Mnod_2474  transcriptional regulator, MucR family  59.38 
 
 
168 aa  184  6e-46  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_4944  MucR family transcriptional regulator  66.67 
 
 
158 aa  179  1e-44  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2100  transcriptional regulator, MucR family  67.07 
 
 
166 aa  179  2e-44  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_7194  transcriptional regulator, MucR family  66.17 
 
 
145 aa  177  4e-44  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_1890  MucR family transcriptional regulator  65.93 
 
 
143 aa  177  4e-44  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2091  transcriptional regulator, MucR family  69.75 
 
 
162 aa  177  4.999999999999999e-44  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2620  transcriptional regulator, MucR family  69.6 
 
 
140 aa  176  2e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.297322  n/a   
 
 
-
 
NC_011894  Mnod_1808  transcriptional regulator, MucR family  69.35 
 
 
160 aa  175  2e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_7402  transcriptional regulator, MucR family  71.31 
 
 
133 aa  176  2e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.169134  n/a   
 
 
-
 
NC_011894  Mnod_3845  transcriptional regulator, MucR family  70.4 
 
 
135 aa  175  3e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.581929  n/a   
 
 
-
 
NC_011894  Mnod_3902  transcriptional regulator, MucR family  58.72 
 
 
172 aa  175  3e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2365  transcriptional regulator, MucR family  59.43 
 
 
176 aa  175  3e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4973  transcriptional regulator, MucR family  66.23 
 
 
160 aa  175  3e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2484  transcriptional regulator, MucR family  71.67 
 
 
134 aa  174  4e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.281768  n/a   
 
 
-
 
NC_009720  Xaut_2239  MucR family transcriptional regulator  60.14 
 
 
154 aa  174  5e-43  Xanthobacter autotrophicus Py2  Bacteria  normal  0.247755  normal  0.0103363 
 
 
-
 
NC_011894  Mnod_5073  transcriptional regulator, MucR family  70.16 
 
 
139 aa  174  5e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6742  MucR family transcriptional regulator  68 
 
 
143 aa  174  6e-43  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0991744 
 
 
-
 
NC_009720  Xaut_1838  MucR family transcriptional regulator  64.57 
 
 
155 aa  174  6e-43  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0743894  normal  0.315346 
 
 
-
 
NC_010511  M446_4730  MucR family transcriptional regulator  67.2 
 
 
145 aa  174  6e-43  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_0549  transcriptional regulator, MucR family  67.5 
 
 
147 aa  173  8e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.973698  n/a   
 
 
-
 
NC_010505  Mrad2831_0075  MucR family transcriptional regulator  63.31 
 
 
166 aa  173  9e-43  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3559  transcriptional regulator, MucR family  64.18 
 
 
144 aa  173  9.999999999999999e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6580  MucR family transcriptional regulator  70.49 
 
 
133 aa  171  2.9999999999999996e-42  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0358165 
 
 
-
 
NC_011887  Mnod_8109  transcriptional regulator, MucR family  59.09 
 
 
173 aa  171  3.9999999999999995e-42  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_5626  transcriptional regulator, MucR family  72.59 
 
 
133 aa  171  5.999999999999999e-42  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.63695  n/a   
 
 
-
 
NC_010511  M446_4422  MucR family transcriptional regulator  67.69 
 
 
145 aa  170  6.999999999999999e-42  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.705801 
 
 
-
 
NC_011894  Mnod_2468  transcriptional regulator, MucR family  57.4 
 
 
165 aa  170  7.999999999999999e-42  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011887  Mnod_8232  transcriptional regulator, MucR family  67.44 
 
 
150 aa  170  1e-41  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0643273  n/a   
 
 
-
 
NC_011894  Mnod_3504  transcriptional regulator, MucR family  69.17 
 
 
131 aa  169  1e-41  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4253  transcriptional regulator, MucR family  65.41 
 
 
147 aa  169  2e-41  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_0068  transcriptional regulator, MucR family  59.3 
 
 
174 aa  168  3e-41  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_6343  transcriptional regulator, MucR family  65.94 
 
 
189 aa  167  4e-41  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4087  transcriptional regulator, MucR family  67.18 
 
 
141 aa  167  7e-41  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.242362  n/a   
 
 
-
 
NC_010511  M446_5488  MucR family transcriptional regulator  68.91 
 
 
158 aa  166  1e-40  Methylobacterium sp. 4-46  Bacteria  normal  0.622801  normal  0.0617685 
 
 
-
 
NC_009720  Xaut_2842  MucR family transcriptional regulator  63.57 
 
 
139 aa  165  2.9999999999999998e-40  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.840232 
 
 
-
 
NC_010511  M446_6298  MucR family transcriptional regulator  69.35 
 
 
142 aa  163  8e-40  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0539112 
 
 
-
 
NC_011893  Mnod_8789  transcriptional regulator, MucR family  62.12 
 
 
147 aa  163  1.0000000000000001e-39  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.292559  n/a   
 
 
-
 
NC_010511  M446_1889  MucR family transcriptional regulator  61.76 
 
 
156 aa  162  1.0000000000000001e-39  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_5564  MucR family transcriptional regulator  60.99 
 
 
156 aa  161  3e-39  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6743  MucR family transcriptional regulator  63.85 
 
 
156 aa  161  4.0000000000000004e-39  Methylobacterium sp. 4-46  Bacteria  normal  0.328928  normal  0.300512 
 
 
-
 
NC_010511  M446_4116  MucR family transcriptional regulator  67.69 
 
 
140 aa  161  4.0000000000000004e-39  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.147804 
 
 
-
 
NC_010511  M446_5563  MucR family transcriptional regulator  63.11 
 
 
143 aa  160  6e-39  Methylobacterium sp. 4-46  Bacteria  normal  0.550782  normal 
 
 
-
 
NC_010505  Mrad2831_4669  MucR family transcriptional regulator  61.65 
 
 
169 aa  160  6e-39  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_3197  transcriptional regulator, MucR family  55.09 
 
 
158 aa  159  2e-38  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.345502  normal 
 
 
-
 
NC_011894  Mnod_4157  transcriptional regulator, MucR family  63.85 
 
 
141 aa  157  7e-38  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.157923  n/a   
 
 
-
 
NC_010511  M446_5185  MucR family transcriptional regulator  65.29 
 
 
185 aa  156  1e-37  Methylobacterium sp. 4-46  Bacteria  normal  0.238338  normal  0.0253848 
 
 
-
 
NC_007958  RPD_1940  MucR family transcriptional regulator  60.14 
 
 
138 aa  155  2e-37  Rhodopseudomonas palustris BisB5  Bacteria  decreased coverage  0.00262472  normal  0.275978 
 
 
-
 
NC_009621  Smed_6025  MucR family transcriptional regulator  62.31 
 
 
148 aa  155  2e-37  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0116577 
 
 
-
 
NC_010725  Mpop_4977  transcriptional regulator, MucR family  55.35 
 
 
178 aa  155  2e-37  Methylobacterium populi BJ001  Bacteria  normal  0.443589  normal  0.0364251 
 
 
-
 
NC_011004  Rpal_2057  transcriptional regulator, MucR family  60.14 
 
 
138 aa  155  3e-37  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3912  MucR family transcriptional regulator  59.09 
 
 
137 aa  154  5.0000000000000005e-37  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.913011  normal  0.1317 
 
 
-
 
NC_010505  Mrad2831_4896  MucR family transcriptional regulator  51.25 
 
 
180 aa  154  6e-37  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.127609  hitchhiker  0.00352911 
 
 
-
 
NC_007643  Rru_A3766  MucR family transcriptional regulator  64.12 
 
 
140 aa  153  9e-37  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_5315  transcriptional regulator, MucR family  56.3 
 
 
171 aa  153  9e-37  Methylobacterium populi BJ001  Bacteria  normal  0.160957  normal  0.979168 
 
 
-
 
NC_007778  RPB_3519  MucR family transcriptional regulator  58.7 
 
 
139 aa  152  2e-36  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.409098  normal  0.722255 
 
 
-
 
NC_009621  Smed_6057  MucR family transcriptional regulator  59.31 
 
 
151 aa  152  2e-36  Sinorhizobium medicae WSM419  Bacteria  normal  0.320123  normal 
 
 
-
 
NC_009621  Smed_5993  MucR family transcriptional regulator  62.7 
 
 
149 aa  151  2.9999999999999998e-36  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0950336 
 
 
-
 
NC_007964  Nham_2627  MucR family transcriptional regulator  54.68 
 
 
137 aa  151  4e-36  Nitrobacter hamburgensis X14  Bacteria  normal  0.337964  n/a   
 
 
-
 
NC_010505  Mrad2831_5176  MucR family transcriptional regulator  54.19 
 
 
190 aa  151  4e-36  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0997  MucR family transcriptional regulator  53.57 
 
 
170 aa  151  4e-36  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010517  Mrad2831_6410  MucR family transcriptional regulator  53.37 
 
 
172 aa  150  5e-36  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    normal 
 
 
-
 
NC_010514  Mrad2831_6380  MucR family transcriptional regulator  53.37 
 
 
172 aa  150  5e-36  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    n/a   
 
 
-
 
NC_009719  Plav_0871  MucR family transcriptional regulator  59.23 
 
 
138 aa  150  7e-36  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_2227  ROSMUCR transcriptional regulator  53.24 
 
 
137 aa  150  1e-35  Nitrobacter winogradskyi Nb-255  Bacteria  decreased coverage  0.0000658566  normal 
 
 
-
 
NC_011757  Mchl_5240  transcriptional regulator, MucR family  55.56 
 
 
175 aa  150  1e-35  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.672182 
 
 
-
 
NC_010172  Mext_3787  ROSMUCR transcriptional regulator  56.43 
 
 
140 aa  149  1e-35  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_4474  ROSMUCR transcriptional regulator  56.06 
 
 
176 aa  150  1e-35  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_4773  ROSMUCR transcriptional regulator  55.56 
 
 
175 aa  149  1e-35  Methylobacterium extorquens PA1  Bacteria  normal  0.494992  normal 
 
 
-
 
NC_010725  Mpop_4988  transcriptional regulator, MucR family  55.88 
 
 
177 aa  150  1e-35  Methylobacterium populi BJ001  Bacteria  normal  0.103901  normal  0.173335 
 
 
-
 
NC_011757  Mchl_4938  transcriptional regulator, MucR family  56.06 
 
 
176 aa  150  1e-35  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.686756  normal  0.493177 
 
 
-
 
NC_011894  Mnod_4660  transcriptional regulator, MucR family  55.15 
 
 
139 aa  149  2e-35  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.20016  n/a   
 
 
-
 
NC_011894  Mnod_0124  transcriptional regulator, MucR family  55.65 
 
 
137 aa  149  2e-35  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.376819  n/a   
 
 
-
 
NC_010511  M446_0587  MucR family transcriptional regulator  58.54 
 
 
157 aa  149  2e-35  Methylobacterium sp. 4-46  Bacteria  normal  0.0109398  hitchhiker  0.00472777 
 
 
-
 
NC_010511  M446_4097  MucR family transcriptional regulator  60.63 
 
 
143 aa  148  3e-35  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.812633 
 
 
-
 
NC_009485  BBta_3042  MucR family transcriptional regulator  54.89 
 
 
138 aa  147  6e-35  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009622  Smed_6371  MucR family transcriptional regulator  58.91 
 
 
137 aa  147  7e-35  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3060  transcriptional regulator, MucR family  56.93 
 
 
162 aa  147  8e-35  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_2834  ROSMUCR transcriptional regulator  56.93 
 
 
162 aa  147  8e-35  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
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