Gene Smed_6371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6371 
Symbol 
ID5320674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp36540 
End bp36953 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content58% 
IMG OID640777960 
ProductMucR family transcriptional regulator 
Protein accessionYP_001314892 
Protein GI150378298 
COG category[K] Transcription 
COG ID[COG4957] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGAAT CGGGTTTGAG CAATGCGGAG CGGAAGCTGG AGCTGACAAG CCGGATCGTC 
GCAGCCTATC TAAGTCGCAA CGCGGTTCCT GCCGGCGATT TGCCGGATCT TATCCAGCAG
ACCTATTCCT CTCTGAGCGG GACATCTCCG CGACATCAGG CTGAACCGGC CGTTGAAGAA
CAGCGCCCCG CCATTCCGCT CAAGAAGTCC GTAACAGTCG ATTTCATCAT CTGCCTAGAG
GATGGTGAAA AGTTCAAGTC CCTGAGGCGC CACCTGATGG CAAAGTACGG CCTCACTCCG
GAGCAATACC GGGAAAAGTG GGGCCTCCCC GATGACTACC CCATGATTGC TCCAAGCTAT
GCTCGACAAC GCTCCGAGCT TGCGCGCGCG TCCGGGCTGG GCAAGAAACG GTAG
 
Protein sequence
MSESGLSNAE RKLELTSRIV AAYLSRNAVP AGDLPDLIQQ TYSSLSGTSP RHQAEPAVEE 
QRPAIPLKKS VTVDFIICLE DGEKFKSLRR HLMAKYGLTP EQYREKWGLP DDYPMIAPSY
ARQRSELARA SGLGKKR