9 homologs were found in PanDaTox collection
for query gene Rmar_1643 on replicon NC_013501
Organism: Rhodothermus marinus DSM 4252



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013501  Rmar_1643  CRISPR-associated protein Cas6  100 
 
 
239 aa  482  1e-135  Rhodothermus marinus DSM 4252  Bacteria  normal  0.0578502  n/a   
 
 
-
 
NC_002950  PG2020  CRISPR-associated Cas5e family protein  35.14 
 
 
221 aa  141  9.999999999999999e-33  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.13521 
 
 
-
 
NC_007355  Mbar_A0301  CRISPR-associated Cas6 family protein  24.68 
 
 
246 aa  62  0.000000008  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0414334  normal 
 
 
-
 
NC_010803  Clim_0438  CRISPR-associated protein Cas6  24.62 
 
 
266 aa  61.2  0.00000001  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_1121  CRISPR-associated Cas6 family protein  21.95 
 
 
241 aa  48.9  0.00007  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1007  CRISPR-associated Cas family protein  22.4 
 
 
250 aa  47.8  0.0002  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.000750551  n/a   
 
 
-
 
NC_009616  Tmel_1676  CRISPR-associated Cas family protein  21.4 
 
 
243 aa  44.3  0.002  Thermosipho melanesiensis BI429  Bacteria  normal  0.602428  n/a   
 
 
-
 
NC_011060  Ppha_2448  CRISPR-associated protein Cas6  28.07 
 
 
264 aa  43.1  0.004  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.970754  n/a   
 
 
-
 
NC_008639  Cpha266_2044  CRISPR-associated Cas family protein  27.68 
 
 
267 aa  42  0.008  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.0876015  n/a   
 
 
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