| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1007 |
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| Symbol | |
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| ID | 6092437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | + |
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| Start bp | 1051442 |
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| End bp | 1052194 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 642488203 |
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| Product | CRISPR-associated Cas family protein |
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| Protein accession | YP_001739040 |
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| Protein GI | 170288802 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1583] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01877] CRISPR-associated endoribonuclease Cas6 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000750551 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTGA AAGTTTCTTT TCAGGCGATG GAAAGCACTG TTCCGTTGAA TTACAACTAT
TTTCTTTCTT CTTTCATCTA CAAGAGATTG GCTTCACAGA ATGAAAACTT TGCCAGATTC
CTTCACGAGA AGGGTTATGG GAAGAGGTTC AAGTTTTTCA CTTTTTCACA ACTTTTCTTT
GAAAATTCCA GAGTCAGCGG TGAGAGAATC TTCATATTTC CAGGAAAAGG ATGGTGGTAC
ATCTCATCCC CAGTAGTTGA ATTCGTCAGG TACATGTTTT CTTCTCTCTC CGAAGATCCC
GTGATCAGGG TAGGAAAAAC AGAGTTCATC GTGAAATCCA TTGACATCGA AAATTCTCTT
CCTGACCAGT CGGAATACCA CTTTATCATG CTGTCACCGC TTGTGGTCAG TGTACCTGAA
GAAAACAATG GAAAGCTTTA CCACAGGTAT CTTCATCCGG AAGAAGAAGA GTTCTACGAA
GTTTTCAGAA AAAATCTTAT GAAGAAGTAC AGAGCTTTTT ACGGAAAAGA TCCAGAAGGC
ACTGTTGAAG TCATCCCCGA TTGGGATTAC ATCAAATCAC GTCATCGGAT AACCAAGAGG
ATCAAATTGA AAAACGCGTT CGTCAGAGCC GTGGTTTTCC CGTTCAAAAT CAGGGGCGAG
AAAAAGCTTG TAGAGATCGG CTATGAAGCG GGTTTTGGAG AGAAAAACAG CATGGGATTC
GGAATGGTAG CCTTGAAAAA ATATGAGAGG TGA
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| Protein sequence | MRLKVSFQAM ESTVPLNYNY FLSSFIYKRL ASQNENFARF LHEKGYGKRF KFFTFSQLFF
ENSRVSGERI FIFPGKGWWY ISSPVVEFVR YMFSSLSEDP VIRVGKTEFI VKSIDIENSL
PDQSEYHFIM LSPLVVSVPE ENNGKLYHRY LHPEEEEFYE VFRKNLMKKY RAFYGKDPEG
TVEVIPDWDY IKSRHRITKR IKLKNAFVRA VVFPFKIRGE KKLVEIGYEA GFGEKNSMGF
GMVALKKYER
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