| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG2020 |
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| Symbol | |
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| ID | 2553050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | - |
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| Start bp | 2111698 |
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| End bp | 2112363 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637150598 |
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| Product | CRISPR-associated Cas5e family protein |
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| Protein accession | NP_906088 |
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| Protein GI | 34541609 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1583] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01877] CRISPR-associated endoribonuclease Cas6 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.13521 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGAATAG AACTATCCAT CAAGGCAGAC GATTCATTAG TCTCTTTTTC TCACCAACAT
TTGCTCGTCG GCACTCTTCA AAAATGGCTC GGAGAAAACG ATATGCACGG CAAAAGTATC
TCCTATTCAT TTTCTCGTCT CAATGGGGGC AAACTCGTAT CAGAACTCAA CAGTATTCTC
TTTGCCGATT GGGCCAATAT GTTTGTCAGT GCTCATGATC CGGAGCTTAT CAGACGTATG
CTGGCAGGGA TTCGTCAAGA TCCCGAAATG TTCAAAAGCC TCTGCGTCCG GGAAGTGACC
GTTATCGAAG ATCCCGACAT GACCGATCGC GAAATTTTCT TTCCTGCCAG CCCTATCCTG
CTGAAGCGTT GGCGCGAGGA CAATGGGTTC GACCATATAG TCTATACGGA CGAAGCAGCC
AATGCCCTAC TGACAGAAAA TCTTCGCAAA AAACTTCAGG CGGTAGGAAT CGATGACCCT
ACTGCCACCG CATCCTTTGT CCCCGATCAG GGGAAAGCCA AGGTGATGCT TATCGATTAC
CGGGGAGTGA AAAACAAAGC CAGTTGGTGC CCTATCCGCA TAATAGGGAA TGCCGAGACC
AAGCTGTTCG CATGGAACGC GGGCATCGGC AACTCAACCG GCATCGGCTT CGGTGCCATA
AAATGA
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| Protein sequence | MRIELSIKAD DSLVSFSHQH LLVGTLQKWL GENDMHGKSI SYSFSRLNGG KLVSELNSIL
FADWANMFVS AHDPELIRRM LAGIRQDPEM FKSLCVREVT VIEDPDMTDR EIFFPASPIL
LKRWREDNGF DHIVYTDEAA NALLTENLRK KLQAVGIDDP TATASFVPDQ GKAKVMLIDY
RGVKNKASWC PIRIIGNAET KLFAWNAGIG NSTGIGFGAI K
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