| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1676 |
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| Symbol | |
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| ID | 5298392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1663824 |
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| End bp | 1664555 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 640769952 |
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| Product | CRISPR-associated Cas family protein |
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| Protein accession | YP_001306904 |
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| Protein GI | 150021550 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1583] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01877] CRISPR-associated endoribonuclease Cas6 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.602428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAGATTGA GAGTAAAATT TAACTTTGAT AGGTTAAATT TGCCTATTCA TTATAATCAT
ATTTTACATG CAACTATTTT AAATATGATT AATAATGAAG AATTTAGAAA ATTTATTCAT
GATAGAGGTT ATAAATTTGA AAAAAGGGTT TTTAAATTGT ATACTTTTTC AAGATTAATT
GGAAGATTTG AAATTGATAC GGAGATTAAG GAAATTAATT TCTTTGATAA TGTATATTTG
TATATTTCAT CATATGATGA CAATTTTTGT TATTATATTA TGGAAAAACT TTTAACATTT
GAAAATATTA GAATGGGTAA AAATATTTTG AAAGTAGAAA AGATTGAAAC AATAAACTTT
ATGCCTACTG ATACCTTAAA AGTAGTAACC AGATCACCAG TTACTGTTTA CTCAACTTAC
ATTGATGAAA CAGGAAAGAA AAAAACTCTT TTTTACCATC CAGATGATTT TAAATTTAAA
GAGATAGTGG AGAAAAACAT TATAAAGAAA TATAGAGCAT TACATAATAG AGAACCACAA
GGACGCATTG AAGTAAAGCA TGTTGGGAAG TCCCCTAAAT TTGTTTTGGT ATTTTACAAA
GGATTTAAAA TTAAAGGCTG GATGACAGCA TTTGATTTAA TTGGTGATCC TGAACTTGTA
AAGATAGCTT ATGAAACAGG TCTTGGGAGT AAAAACTCCC AAGGTTTTGG TTTTATAGAA
CAAATTAAGT GA
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| Protein sequence | MRLRVKFNFD RLNLPIHYNH ILHATILNMI NNEEFRKFIH DRGYKFEKRV FKLYTFSRLI
GRFEIDTEIK EINFFDNVYL YISSYDDNFC YYIMEKLLTF ENIRMGKNIL KVEKIETINF
MPTDTLKVVT RSPVTVYSTY IDETGKKKTL FYHPDDFKFK EIVEKNIIKK YRALHNREPQ
GRIEVKHVGK SPKFVLVFYK GFKIKGWMTA FDLIGDPELV KIAYETGLGS KNSQGFGFIE
QIK
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