| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2448 |
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| Symbol | |
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| ID | 6461342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2531693 |
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| End bp | 2532487 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642728628 |
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| Product | CRISPR-associated protein Cas6 |
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| Protein accession | YP_002019250 |
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| Protein GI | 194337456 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1583] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01877] CRISPR-associated endoribonuclease Cas6 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.970754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCATAA CCCTCGAACT CTCCCACCGC AAGCGTACGG TCACGCTTCC AATAAACAAC
AGCCATCTCA TCTCCTCCCT GATCTACAAC ATCGTCGATA AAAGCTCAAG CGAGTATGCC
GAACGGTTGC ATGATCAGGG ATACCGGCTT CAGAACAGGG CGTTCAAGCT CTTTACCTTT
TCGCCGCTCT ATCCGGGCAA TCGGCACAAG TGGGTGATGC ATGAGAACGG GACGATGAGT
ACCGCTGACG CGTTGCTGCA TGTTACGATC TCTTCTCCGA AGGAGGAGTT TGTCGAGCAT
CTGGTGATTG GTTTGTTGCA GGAGCCCTAT GTCTGGGTCG GCAATGAACG GTTTCGGGTA
GAGACGGTGC GAAAGCTTGA TCAGCCGGAG TTGAGTGATG ATATGGAGTT TGTGATGCTT
TCACCTCTGG TTTGCACCAC AAAGGGGGAG GCTGATCACT ATCCGCAGTA TTTGTATCCC
GGTGATCCGG AGTTTGAACG GGTGCTGCTT GAAAATCTTT GCCGGAAGTA TCAGGTGCTG
CATGGGCGGT CGTTTGTGTG CGAGAGCGGG CAGTTTGGTT TTGCTATTGA TGAGGCTTAT
GTGGAGCGGA TGCAGGGGAA GGTTCAGAAG CTGATTACGC TGAAGGAGGG GCGTTCTGAT
GAGACGAAGA TCAAGGGGAC GCTTGCACCG TTCAGGCTGA GGGCTCCACG GGAGCTGATG
GAGGTTGGGT ATGCGTGCGG TTTTGGCGAA AAGAACTCGA TGGGTTTTGG AATGGTGAAG
GTTGATGAAG CTTGA
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| Protein sequence | MRITLELSHR KRTVTLPINN SHLISSLIYN IVDKSSSEYA ERLHDQGYRL QNRAFKLFTF
SPLYPGNRHK WVMHENGTMS TADALLHVTI SSPKEEFVEH LVIGLLQEPY VWVGNERFRV
ETVRKLDQPE LSDDMEFVML SPLVCTTKGE ADHYPQYLYP GDPEFERVLL ENLCRKYQVL
HGRSFVCESG QFGFAIDEAY VERMQGKVQK LITLKEGRSD ETKIKGTLAP FRLRAPRELM
EVGYACGFGE KNSMGFGMVK VDEA
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