Gene Rmar_1643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1643 
Symbol 
ID8568295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand- 
Start bp1905720 
End bp1906439 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content68% 
IMG OID 
ProductCRISPR-associated protein Cas6 
Protein accessionYP_003290917 
Protein GI268317198 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0578502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTAC GACTGCTGTT GACGCCGTCC TGTGAGCCGG TGCCGTTCAC CTATCCCCAC 
CGGCTGGCGG GCGTGTTGCA CCGCTGGCTG GGACAGAACG ACTGGCACGA TAGCCTGAGT 
CTCTACAGCT TCGGCTGGCT GCAGGGGGGA CGCATGGGGA GAGGCGGTCT GCACTTCCCG 
AAGGGAGCGT TCTGGACGCT CAGTTTCTAC GAGGGCGAGC CGGTGGAGCG GCTGGTGCGG 
GGAATTTTCC GGGACCCGAC CGTGATTGCC GGGATGGCCG TGGCCAGCGT GCAGACGCTA 
CCGGTACCTT CGTTCGGCCA GCGGGCCGTG TTTCGCGTGG AGAGTCCGGT CGTGGCGCGG 
CGCGTGCGCG CCGACGGCGG GCGGGACTAC CTGACCTGGG AGGACGAGGC GGCCGACGAG 
GTGCTCACGC GCGTGCTGCG TCGCAAGCTG GTGGCGGCCG GGCTGGGCCA TCTGGCGCCG 
CAGGCCACCA TACGTTTCGA TCGGCGCTAC CGCGGAGCCA AGACCAAGCT TGTGCGCATC 
AAGGGGATCG ACCACCGGGG CAGCCTGTGT CCGGTGATCG TCGAAGGACC GCCCGAGGCC 
GTGCAGTTTG CCTGGCTGGT GGGCGCGGGC GAGCTCACTG GCTGCGGCTT CGGCGCCCTG 
AGCGAGCCGG TGTGCAGGGA AAGACCGAAA CGGCGAGCCT TTCAACAAAT GCAGGCCTGA
 
Protein sequence
MRLRLLLTPS CEPVPFTYPH RLAGVLHRWL GQNDWHDSLS LYSFGWLQGG RMGRGGLHFP 
KGAFWTLSFY EGEPVERLVR GIFRDPTVIA GMAVASVQTL PVPSFGQRAV FRVESPVVAR 
RVRADGGRDY LTWEDEAADE VLTRVLRRKL VAAGLGHLAP QATIRFDRRY RGAKTKLVRI 
KGIDHRGSLC PVIVEGPPEA VQFAWLVGAG ELTGCGFGAL SEPVCRERPK RRAFQQMQA