17 homologs were found in PanDaTox collection
for query gene RS02344 on replicon NC_003296
Organism: Ralstonia solanacearum GMI1000



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003296  RS02344  hypothetical protein  100 
 
 
612 aa  1245    Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.280791 
 
 
-
 
NC_011662  Tmz1t_1124  Heparinase II/III family protein  57.68 
 
 
616 aa  681    Thauera sp. MZ1T  Bacteria  normal  0.781044  n/a   
 
 
-
 
NC_010718  Nther_2527  Heparinase II/III family protein  30.21 
 
 
675 aa  227  5.0000000000000005e-58  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.0000557992 
 
 
-
 
NC_013037  Dfer_4034  Heparinase II/III family protein  32.08 
 
 
630 aa  200  6e-50  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.0114283 
 
 
-
 
NC_008009  Acid345_3793  heparinase II/III-like  25.79 
 
 
627 aa  100  6e-20  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_0433  heparinase II/III family protein  25.05 
 
 
668 aa  99  2e-19  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.0485794 
 
 
-
 
NC_008261  CPF_0471  heparinase II/III-like protein  21.58 
 
 
630 aa  98.2  3e-19  Clostridium perfringens ATCC 13124  Bacteria  unclonable  0.00000500761  n/a   
 
 
-
 
NC_011145  AnaeK_1385  Heparinase II/III family protein  27.2 
 
 
702 aa  87.4  7e-16  Anaeromyxobacter sp. K  Bacteria  normal  0.16373  n/a   
 
 
-
 
NC_011891  A2cp1_1481  Heparinase II/III family protein  27.6 
 
 
702 aa  87  9e-16  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.608961  n/a   
 
 
-
 
NC_007760  Adeh_2473  heparinase II/III-like  28.74 
 
 
702 aa  77.8  0.0000000000006  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.21542  n/a   
 
 
-
 
NC_008262  CPR_0460  heparinase II/III-like protein  19.46 
 
 
627 aa  60.5  0.00000008  Clostridium perfringens SM101  Bacteria  hitchhiker  0.00058619  n/a   
 
 
-
 
NC_008554  Sfum_3329  heparinase II/III family protein  27.83 
 
 
528 aa  55.5  0.000003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_23430  putative heparinase  23.11 
 
 
550 aa  54.3  0.000007  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.00000000000712421  hitchhiker  0.00765921 
 
 
-
 
NC_013202  Hmuk_0083  Heparinase II/III family protein  23.35 
 
 
603 aa  52.8  0.00002  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.137335 
 
 
-
 
NC_011884  Cyan7425_3879  Heparinase II/III family protein  25.84 
 
 
766 aa  47  0.001  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_1300  heparinase II/III-like  32.43 
 
 
680 aa  45.8  0.002  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_4954  hypothetical protein  30.77 
 
 
651 aa  44.7  0.006  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  0.00000012677  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>