Gene Nther_2527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2527 
Symbol 
ID6315450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2719506 
End bp2721533 
Gene Length2028 bp 
Protein Length675 aa 
Translation table11 
GC content29% 
IMG OID642644910 
ProductHeparinase II/III family protein 
Protein accessionYP_001918675 
Protein GI188587130 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0000557992 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATCA CAGATATTTT TAAAATCATA AACAATAAAG GATTATCTTG GACATTATTT 
AGACTTACAT ATGAGATTAA AACAAAAACT GGGATATTAA AAAAAAGTTT CCCTACTAGA
GAAATGTCTG ATGATGAAGT GCTTGATAAA ATTGTGGGAT TGTCAAGTAA CACAAAAGCA
GCTCTTGTAA GTCAAATAAG AACAAATTTA AAAAGTTTTT TTGTTAGTTA TAAAGATTTG
GATAAATATC GCGAATTTTT AATACAAAGT TTAACTCAAG ATGAAAGAGA AAATATTATT
TATATTGCTG ATAATGCAAT TGAAGGGAAA ATACCTTGTT TTAGTAAATG GGAAGCGGAT
TTTGGAAATC CGATTAATTG GCATATAAAT CCTGTAACTA AATATGAATG GGATAGTAGT
AAACACTGGG TAGATCTTGA AGAACTATCT AGCAGTGCGG GAGATGTTAA ATATGTCTGG
GAAGCTTCTA GATTTCCTCA TTTTTATTAC TTTGCTCGAG CTTATGCTAT CACAAAAGAT
GAAAAATATG CATTAGCATA TTGGGAACAA GTAGAAAACT GGATTGAAGA TAATCCTTAT
AATATAGGCA TTAACTGGAA ATGTGGTCAA GAAATAGCCA TTAGAATGTA TGCTTGGATA
TTTTGTTTAT ACATTTTTCT AGACACTAAA CACAGCACCA ATGAAAGAAT ATTTAAGTTG
GTTAAAAATT TATATCTTAG CGCTTTAAGA ATAGAAGGTA ATATTAACTT TGCAAGAAAA
GCTGTTCAAA ATAATCATGC TATTAGCGAA GCCGCGGGTT TATTTTCTTT TGGTGTTCTA
TTCCCTTATT TTCGAGACTC AAATAGGCTA AAAAATAAAG GAAAACTTTA CTTAGAACAA
GAGGGTTTAA AACAAATTTT TGATGATGGT AGTTATATTC AAAACTCAGT GAACTATCAG
AGATTAATGC TTCAAACTTA TTCTTGGTGC TATTGTCTAG CTCAAAGAAA TAATATAACT
TTTAATAGCC AATTAACAAG TAAAATAAAA AAATCCATTA ACCTGTTATA TCAGATGCAA
GATGAATTAA CAGGTCAACT ACCTAATTAT GGATCGAATG ATGGAGCACT AATATTTCCC
TTGACTTCTT GTGATTATTT GAATTATAAA CCACAACTTA ATTCTATTTT TTATATCATT
AGTGGACAAA AATTATATGA TGAAGGTAAA CATGAAGAGG AAATGCTATG GTTTTGTGGC
GATGATGCAG TTAAAAATGC TGATAAGACT TTGATTGAAA GAAAAACTAA TAGTTTTAAA
ATCGGAGGTT ATCACATTCT AAGAAACAAT TTTGGCTTTG GAATGATAAA ATGTGGTATA
CACAAAAAAA CTGCTGGACC TGCCGATATG CTGCATTTTG ATTTTTGGTA CAATGGAGTT
AATGTTTTAT GTGATATAGG ATCATATAGT TATAATCCAG AAGATAAATT TAAGGGTTAT
TTTAAAGCAA CACAAAATCA TAATACCATT ACAATAGATG AAAAAAATCA AACCAAAAAT
GGACCAAGGT TTTTGACAAT AGATTGGCCT AATGGATATG TTAGACAATT CGATGAGCAA
AATAATAGTG ATAATAAAAG TGATATGTTT TTCTCAGGTT ATCATGACGG CTATAATAAT
ACTCATACTA GAGAAATTGA ATTTTATGAT AACTACTTGC TAATAAAGGA TAAGATTGAA
AACCGGAAAG AGGATAAATT AAGAGTTAAA TTGAATTGGA ATGTAGGGAC AAGCGTAGAT
AAAATTAGAG ACAATGAGTT CAAATTAAAT GTAAATCAAG AAGAAGCCCT TACAATGCAA
ATTAATAGCT TGACCAGAGG AGATTTCAAT TTATACTATG CTAATGAAGA AATCCCCAAA
GGTTGGAGAT CACTATATTA TGGTGAAAGG ATACCTTGTT ACCAATTAGT TTATGAGATC
AAATCAACTA AACCAATTGA AATAATTGAA ACAAGGATAT ATAAATGA
 
Protein sequence
MKITDIFKII NNKGLSWTLF RLTYEIKTKT GILKKSFPTR EMSDDEVLDK IVGLSSNTKA 
ALVSQIRTNL KSFFVSYKDL DKYREFLIQS LTQDERENII YIADNAIEGK IPCFSKWEAD
FGNPINWHIN PVTKYEWDSS KHWVDLEELS SSAGDVKYVW EASRFPHFYY FARAYAITKD
EKYALAYWEQ VENWIEDNPY NIGINWKCGQ EIAIRMYAWI FCLYIFLDTK HSTNERIFKL
VKNLYLSALR IEGNINFARK AVQNNHAISE AAGLFSFGVL FPYFRDSNRL KNKGKLYLEQ
EGLKQIFDDG SYIQNSVNYQ RLMLQTYSWC YCLAQRNNIT FNSQLTSKIK KSINLLYQMQ
DELTGQLPNY GSNDGALIFP LTSCDYLNYK PQLNSIFYII SGQKLYDEGK HEEEMLWFCG
DDAVKNADKT LIERKTNSFK IGGYHILRNN FGFGMIKCGI HKKTAGPADM LHFDFWYNGV
NVLCDIGSYS YNPEDKFKGY FKATQNHNTI TIDEKNQTKN GPRFLTIDWP NGYVRQFDEQ
NNSDNKSDMF FSGYHDGYNN THTREIEFYD NYLLIKDKIE NRKEDKLRVK LNWNVGTSVD
KIRDNEFKLN VNQEEALTMQ INSLTRGDFN LYYANEEIPK GWRSLYYGER IPCYQLVYEI
KSTKPIEIIE TRIYK