Gene Hmuk_0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0083 
Symbol 
ID8409580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp79202 
End bp81013 
Gene Length1812 bp 
Protein Length603 aa 
Translation table11 
GC content46% 
IMG OID645018410 
ProductHeparinase II/III family protein 
Protein accessionYP_003175930 
Protein GI257386157 
COG category[S] Function unknown 
COG ID[COG5360] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.137335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGATT TCTATTCCGA GCGTTCTCAA AGCGTGGGTG AGCGACTTGC CCTTGGAGTA 
TTCACAGCTG GACGACTGCA GCGGGAGCAG GTTCTGGGCA TTCTTGAGCG AAAAGTCCGT
CACGCGCTCC TTCCAAGGCT CCCTATTGAC TTTGACGCAC GCTATGACGC ACAGGTACCC
AATAAACTCA AACTGACGGC TGGTCCCATT AATGAGAACA CAAGACGTCT CAGAGACAGT
CTAGAACCGG AGACCAAACA ACGTTATCAA GAGCGGTTAA ACCATTTTGA AAATGGACAA
CTCTCGTTTA TTGGTCATGA AGTTTCCCTT GACGCTGACC GGACGATCGA TTGGGACGAT
GATCAACTGG AGGGAATACC CTTGCTCTGG TGGCTCAAAT ACCAATCGCT CGAACCGCTC
AAATGGTTTC TCTTCAGCCC CGAGGAGTCT ATAGACCGGG AACGAGTTGT CCGGGAGGTT
CTTGACCCAT GGGTCCGAAC GATGGCGTCA ACGGCACAGA TTGGCACCCC TGAATATCTT
CGGCGCGACT GGATTCCACA TGCAGTCTCG CTTCGAGTCA TGACTCTTTC TCGGTACTCT
GCCTGGCTCG AAAGTGAAGG AATGATTGCT TCTAGGCAAT TAGTATTAGA ATACTTGTAC
AAGAATGCAC TATTTCTGCA GAATCATATA GAAACCGATG TCGGTGGGAA CCATCTAATT
GAGAACGCTC TGGCCTTGCT TATGGCTGGA TTGATCTTTC AGCAGGCCGA TGAATGGATC
CGAAGCGGAA CGGAATTATT TGAGCGAACG GCTATAAACC AGTTTCTCGG GGATGGCAGT
CATTTTGAAA AGAGCCCGAT GTATCATATT ATGTCTCTTA GGAGGATGTT AACTTCCATT
GGACTTTTAT CCAAGTATGG TTACTCCATC CCACAGACCA TTCAACATAG TGCTGAGAAG
GCGACAGAGT TTTTAACATA CCTAACTCCA CCAGATGGAC AGATTCCCCT ATTAAATGAT
TCTCAGTTTT ATCAAGTACT TTCGATTTCA GAGATTTTAC TGTATGCTGA CAAAATAGAC
ATTACGGCGG ACAACAATCC AGACCAGTTT GGAGCTTCAG GGTACTATTG GCTAGGAAGC
GGTGCTGATC GTATGCTTGT TGATGGTGGA TGTGTTGGCC CTCCCCATTT GCCTGGCCAT
TCTCACATTG ATCTCCTCAG CATTCTGCTG TGGCTTGATG GTAACCGTGT ACTCACCGAT
ACGGGGGTCT ACCAGTATGC AGATGATGTT CACCGTCAGT ATGCGAGGAG TATTAAAGCA
CATAATTCAG TTCAAGTCGG TGATTGCAAT CCGATCAAAA TCGGTGGACA ATATCTTATG
GGTCGCCGGA CGGCACCTGA AACTACCATG TCTCGCAACG AATCATTTAA GCAATTTGAG
GGGAAGTATG AGGTAGAAGG ATTTCTCAAA CCGTTATACA CACATAAAAG ACGAATTCAG
ACAAATGGGA AGTGGTGGCT GGTCACTGAT GAGGTCTCCA GTCACGGGGA TCGCCCCATT
ATCTCACGAC TTCATTTTCA TCCCTCAATA GATTTGAAAA AAGTAGATGA TGCAAAATTC
AATATAATTT ATGATTCTGA ATATCTGCTC GGGTATCTCC AAGCATTGCA CTGTGAGAGT
ATCGTACTTG ACACAAGCCC CTACTTTCCC GAATTTGGGA CCAAGATTAG CAGAAAGGTG
CTTGAACTGA GATACGAATC GACTCCCGCA GGATATGTTA TTTCAAAAAA TGAAGGTTCT
GAAGTGAAGT GA
 
Protein sequence
MNDFYSERSQ SVGERLALGV FTAGRLQREQ VLGILERKVR HALLPRLPID FDARYDAQVP 
NKLKLTAGPI NENTRRLRDS LEPETKQRYQ ERLNHFENGQ LSFIGHEVSL DADRTIDWDD
DQLEGIPLLW WLKYQSLEPL KWFLFSPEES IDRERVVREV LDPWVRTMAS TAQIGTPEYL
RRDWIPHAVS LRVMTLSRYS AWLESEGMIA SRQLVLEYLY KNALFLQNHI ETDVGGNHLI
ENALALLMAG LIFQQADEWI RSGTELFERT AINQFLGDGS HFEKSPMYHI MSLRRMLTSI
GLLSKYGYSI PQTIQHSAEK ATEFLTYLTP PDGQIPLLND SQFYQVLSIS EILLYADKID
ITADNNPDQF GASGYYWLGS GADRMLVDGG CVGPPHLPGH SHIDLLSILL WLDGNRVLTD
TGVYQYADDV HRQYARSIKA HNSVQVGDCN PIKIGGQYLM GRRTAPETTM SRNESFKQFE
GKYEVEGFLK PLYTHKRRIQ TNGKWWLVTD EVSSHGDRPI ISRLHFHPSI DLKKVDDAKF
NIIYDSEYLL GYLQALHCES IVLDTSPYFP EFGTKISRKV LELRYESTPA GYVISKNEGS
EVK