Gene Ping_0433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0433 
Symbol 
ID4625446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp548990 
End bp550996 
Gene Length2007 bp 
Protein Length668 aa 
Translation table11 
GC content40% 
IMG OID639795629 
Productheparinase II/III family protein 
Protein accessionYP_941892 
Protein GI119944212 
COG category[S] Function unknown 
COG ID[COG5360] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0485794 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCTT TATCTTGGTA TGTAAAACGT ATTAAAACTA TGTCAACACA AGAAATAACT 
TGGCGTGTCA GATCATTATC TGCAGCACTG TTAGAGCATA CCCGTGTAAA AATGAATATT
ATTGCATCCC CGGCATTTCA AGCCGGCTAT CAAGAGCAAG CGCCCTTTTC TCCGCCATTC
CGAGTTTTTG TTGGTGATAT TAAACAATTT AATACTCAAT GGCGCCCGGC ATTGCTAACT
AAAGCAGATC ACATTTTACA ACACAAGCTC AGTTATTTTA ATTTACATGA TCTGGATTTA
GAAACGCCTA TTAACTGGCA TAAAGATCAT GCGACAGGAC AACAAACTAG CCGCGCTGCT
ATCATGACGG TCAATTATCG TGATATTAAA AAAAATGGCG ACTGCAAGTT AGTTTGGGAA
CCTAACCGTC ATCATCAGTT TGTTGTTTTG GCGCGCGCTT ATCAGGTGAC GGGTGACTTA
AAATATGCAC AGGGTGTCAT CTCTCAAATA ACCAGCTGGC TAGATGCCAA CCCATACGGT
TATGGCATGA ACTGGAAAAA CCCGCTTGAA CTGGGGATAA GAATCATTAA TTGGGTATGG
GCAATTGACT TAATTCTAGA CTCAGGATTA TTTACCGGTG AATTTAAAGC TCGCTTATTG
CATAGTGTCT ATCTGCATTG TCGAGATGTT AGTGGTAAAT TCTCACAGGG CTCATCTGCG
AATAATCATT TAGTCGGAGA AGCCGCAGGT GTTTATATTG CTGCCAGCTA TTTTTCAATC
TTAAAAGATG CACCAACGTG GCAGAAAAAA AGTAAAGCCG TTTTAGAAAA TGAAATACAA
GCACAAACCT TTTCCGATGG CGGCTCCAAA GAGCACGGTT TTAGCTATCA ATTTTTTGTT
TTCCAGCTTT ATCTGTTTTC ATCACAAATT GCGCACTGGC AAAATAATAA TTTTTCTTCT
GGATACCAGC ATACCTTAAA TAAACTCGCT GAATTTATCG CCATCATTGC ACAAGGAGGG
CAGGACTACC CGATGCTGGG TGATCAAGAT GATGGCTATG CACTGGATCT TGGTAATTAT
GTTCATGATA TTAACGCACT TTGCGATTTG GCTTCTCATC TTTACGATAA TGAAATATTC
CGCATCAACG CCCAAGAAGC AAGTGAAGCA GCATTTTGGT TATTCAATCA ACGGGGCAGA
GATAAAAATC TTGCCTTCTC TTTACAACCG ACGCCTTTAG CATCGCATAA ATTTGTCGAA
TCTGGTTATT ATTTGCTACA AGCCGGTAGT CTAAAGACTA ATGATCAGGT GAGTGTTTTA
TTTGATTGTG CTGAACTCGG CTATACATCC ATTGCCGCTC ATGGTCATGC TGACGCATTA
AGTCTTGTGA TGCGCCTCAA TGGTCAAGAT TTATTAGCCG ATAGTGGCAC CTATGATTAT
TACAGTTTTC CTCATTGGCG AGATCACTTT AGAAAGACAC AAGCACACAA TACAATCGAG
GTAGATGGGT TAGATCAATC AGTTATGACT GGACCATTTA TGTGGGAAAA ACATGCGCAA
GCACAATGTA CAGTTTGGGA GCCAAATAAT ACAGGAGGAA TCGTCACAGG CACGCATAAT
GGCTATTTAC GACTCACTTC TCCCGTCACT CATCAGCGAA GTTTAAATTT AAATACGCAA
CAAAAAAAAC TGCAAATAAC AGATCAAATA CAATCACAAG GCGACCATAA TATTGCGCTC
TATTTCCATC TATCGGAATA TTGTGCTGAT ATAAAGGTTG ACGGTCAATT TTGTAGTCTC
ATCTTAGGCA CTTCTAAGGT GATAATAACT TTACCTGATA ACTTAATGTT AGAAGCAATA
CAGGGAGAGT GGCACCAAGA TCCCAATCAT GTATCACTTG GCTGGATTAG CCGTGGTTAT
CACCAAAGAA CGCCGATCAC CACTTTAATC GCCAGAGGAA AGACAACGAC TAGCCAACAA
TTTACAACAT CTATCCAGTG GCTCTAA
 
Protein sequence
MQSLSWYVKR IKTMSTQEIT WRVRSLSAAL LEHTRVKMNI IASPAFQAGY QEQAPFSPPF 
RVFVGDIKQF NTQWRPALLT KADHILQHKL SYFNLHDLDL ETPINWHKDH ATGQQTSRAA
IMTVNYRDIK KNGDCKLVWE PNRHHQFVVL ARAYQVTGDL KYAQGVISQI TSWLDANPYG
YGMNWKNPLE LGIRIINWVW AIDLILDSGL FTGEFKARLL HSVYLHCRDV SGKFSQGSSA
NNHLVGEAAG VYIAASYFSI LKDAPTWQKK SKAVLENEIQ AQTFSDGGSK EHGFSYQFFV
FQLYLFSSQI AHWQNNNFSS GYQHTLNKLA EFIAIIAQGG QDYPMLGDQD DGYALDLGNY
VHDINALCDL ASHLYDNEIF RINAQEASEA AFWLFNQRGR DKNLAFSLQP TPLASHKFVE
SGYYLLQAGS LKTNDQVSVL FDCAELGYTS IAAHGHADAL SLVMRLNGQD LLADSGTYDY
YSFPHWRDHF RKTQAHNTIE VDGLDQSVMT GPFMWEKHAQ AQCTVWEPNN TGGIVTGTHN
GYLRLTSPVT HQRSLNLNTQ QKKLQITDQI QSQGDHNIAL YFHLSEYCAD IKVDGQFCSL
ILGTSKVIIT LPDNLMLEAI QGEWHQDPNH VSLGWISRGY HQRTPITTLI ARGKTTTSQQ
FTTSIQWL