Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0433 |
Symbol | |
ID | 4625446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 548990 |
End bp | 550996 |
Gene Length | 2007 bp |
Protein Length | 668 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639795629 |
Product | heparinase II/III family protein |
Protein accession | YP_941892 |
Protein GI | 119944212 |
COG category | [S] Function unknown |
COG ID | [COG5360] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0485794 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATCTT TATCTTGGTA TGTAAAACGT ATTAAAACTA TGTCAACACA AGAAATAACT TGGCGTGTCA GATCATTATC TGCAGCACTG TTAGAGCATA CCCGTGTAAA AATGAATATT ATTGCATCCC CGGCATTTCA AGCCGGCTAT CAAGAGCAAG CGCCCTTTTC TCCGCCATTC CGAGTTTTTG TTGGTGATAT TAAACAATTT AATACTCAAT GGCGCCCGGC ATTGCTAACT AAAGCAGATC ACATTTTACA ACACAAGCTC AGTTATTTTA ATTTACATGA TCTGGATTTA GAAACGCCTA TTAACTGGCA TAAAGATCAT GCGACAGGAC AACAAACTAG CCGCGCTGCT ATCATGACGG TCAATTATCG TGATATTAAA AAAAATGGCG ACTGCAAGTT AGTTTGGGAA CCTAACCGTC ATCATCAGTT TGTTGTTTTG GCGCGCGCTT ATCAGGTGAC GGGTGACTTA AAATATGCAC AGGGTGTCAT CTCTCAAATA ACCAGCTGGC TAGATGCCAA CCCATACGGT TATGGCATGA ACTGGAAAAA CCCGCTTGAA CTGGGGATAA GAATCATTAA TTGGGTATGG GCAATTGACT TAATTCTAGA CTCAGGATTA TTTACCGGTG AATTTAAAGC TCGCTTATTG CATAGTGTCT ATCTGCATTG TCGAGATGTT AGTGGTAAAT TCTCACAGGG CTCATCTGCG AATAATCATT TAGTCGGAGA AGCCGCAGGT GTTTATATTG CTGCCAGCTA TTTTTCAATC TTAAAAGATG CACCAACGTG GCAGAAAAAA AGTAAAGCCG TTTTAGAAAA TGAAATACAA GCACAAACCT TTTCCGATGG CGGCTCCAAA GAGCACGGTT TTAGCTATCA ATTTTTTGTT TTCCAGCTTT ATCTGTTTTC ATCACAAATT GCGCACTGGC AAAATAATAA TTTTTCTTCT GGATACCAGC ATACCTTAAA TAAACTCGCT GAATTTATCG CCATCATTGC ACAAGGAGGG CAGGACTACC CGATGCTGGG TGATCAAGAT GATGGCTATG CACTGGATCT TGGTAATTAT GTTCATGATA TTAACGCACT TTGCGATTTG GCTTCTCATC TTTACGATAA TGAAATATTC CGCATCAACG CCCAAGAAGC AAGTGAAGCA GCATTTTGGT TATTCAATCA ACGGGGCAGA GATAAAAATC TTGCCTTCTC TTTACAACCG ACGCCTTTAG CATCGCATAA ATTTGTCGAA TCTGGTTATT ATTTGCTACA AGCCGGTAGT CTAAAGACTA ATGATCAGGT GAGTGTTTTA TTTGATTGTG CTGAACTCGG CTATACATCC ATTGCCGCTC ATGGTCATGC TGACGCATTA AGTCTTGTGA TGCGCCTCAA TGGTCAAGAT TTATTAGCCG ATAGTGGCAC CTATGATTAT TACAGTTTTC CTCATTGGCG AGATCACTTT AGAAAGACAC AAGCACACAA TACAATCGAG GTAGATGGGT TAGATCAATC AGTTATGACT GGACCATTTA TGTGGGAAAA ACATGCGCAA GCACAATGTA CAGTTTGGGA GCCAAATAAT ACAGGAGGAA TCGTCACAGG CACGCATAAT GGCTATTTAC GACTCACTTC TCCCGTCACT CATCAGCGAA GTTTAAATTT AAATACGCAA CAAAAAAAAC TGCAAATAAC AGATCAAATA CAATCACAAG GCGACCATAA TATTGCGCTC TATTTCCATC TATCGGAATA TTGTGCTGAT ATAAAGGTTG ACGGTCAATT TTGTAGTCTC ATCTTAGGCA CTTCTAAGGT GATAATAACT TTACCTGATA ACTTAATGTT AGAAGCAATA CAGGGAGAGT GGCACCAAGA TCCCAATCAT GTATCACTTG GCTGGATTAG CCGTGGTTAT CACCAAAGAA CGCCGATCAC CACTTTAATC GCCAGAGGAA AGACAACGAC TAGCCAACAA TTTACAACAT CTATCCAGTG GCTCTAA
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Protein sequence | MQSLSWYVKR IKTMSTQEIT WRVRSLSAAL LEHTRVKMNI IASPAFQAGY QEQAPFSPPF RVFVGDIKQF NTQWRPALLT KADHILQHKL SYFNLHDLDL ETPINWHKDH ATGQQTSRAA IMTVNYRDIK KNGDCKLVWE PNRHHQFVVL ARAYQVTGDL KYAQGVISQI TSWLDANPYG YGMNWKNPLE LGIRIINWVW AIDLILDSGL FTGEFKARLL HSVYLHCRDV SGKFSQGSSA NNHLVGEAAG VYIAASYFSI LKDAPTWQKK SKAVLENEIQ AQTFSDGGSK EHGFSYQFFV FQLYLFSSQI AHWQNNNFSS GYQHTLNKLA EFIAIIAQGG QDYPMLGDQD DGYALDLGNY VHDINALCDL ASHLYDNEIF RINAQEASEA AFWLFNQRGR DKNLAFSLQP TPLASHKFVE SGYYLLQAGS LKTNDQVSVL FDCAELGYTS IAAHGHADAL SLVMRLNGQD LLADSGTYDY YSFPHWRDHF RKTQAHNTIE VDGLDQSVMT GPFMWEKHAQ AQCTVWEPNN TGGIVTGTHN GYLRLTSPVT HQRSLNLNTQ QKKLQITDQI QSQGDHNIAL YFHLSEYCAD IKVDGQFCSL ILGTSKVIIT LPDNLMLEAI QGEWHQDPNH VSLGWISRGY HQRTPITTLI ARGKTTTSQQ FTTSIQWL
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