Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_23430 |
Symbol | |
ID | 4381145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2036366 |
End bp | 2038018 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639324443 |
Product | putative heparinase |
Protein accession | YP_790028 |
Protein GI | 116051141 |
COG category | [S] Function unknown |
COG ID | [COG5360] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000000712421 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.00765921 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCACTTC AAAAACTCGT CCGTCTCTAT CATACGCTTC GGTACCTGAG GCTCAAGCAG ATAATATTTC GAGTGTATTA TCGCTTTGCC CAGGTCCGAG TTCATATTTA TCGAAATGTT GCTGTGCGTC GTTGGCGTAG GGACTGGTCT GCGCCCTCTT GGAGGAATTT GTCAACGAAT GATGCTGTGG AGTTCACCTT TCTCGGGATA ACAGGGAAAG TGCAGTGCCC CGAGGACTGG CAAGCTGATA GGAGCAGTAA ATTATGGCTC TATAATCTGC ACTATTTGGA TGATCTGAAC GCTAGGGACA TTGGCAGTCA GCCTGGGCTA GCCGATAAAC TAATTCAAAG TTGGATCCAG GCTAATCCAC CGGTATCCGG TGAAGGTTGG GAGCCTTATC CTCTTTCCTT GCGTATCGTT AATCTTGTGA AATGGCTTGC TCGCCATGAT GAGCGTTCGA CCTTTCTGGC GGACAGTCTA GCTGTACAAG CGGACGCGCT GGTGCAACAA GTAGAATATC ATATCTTGGG AAATCATCTA TTCGCTAATG GGAAGGCGTT GGTGTTTGCC GGCGCTTATC TGTCAGGCGC GATGGCTGAT CGTTGGCTTG CCAAGGGGTT ACGGATACTT GACGAAGAGC TTCCTGAGCA ATTTCTGAAT GATGGTGGGC ATTTCGAATT GTCTCCGATG TATCACGCCA CTTTACTCTG GGATATGTGC GACCTGGTGA ATCTCTCCAC GCGGTCGGGC CTACCTGATT TGGCTGAGCG TCTACCGCAA TGGCGAGAGG TTGTGGTCCA AGGATTGAAG TGGCTTCGTA GCATGCAGCA TCCGGATGGT AGAATTAGCT TCTTCAATGA TGCTGCATTC GGAATTGCAC CTGAATATGA AGATATTGCA GCGTACGCCA AGCGCCTCGA TATATCACCT CCAGCTCATG AAAACCACCT GGCGGCGATT TATAATTCGG CTACAGGTTA TGCTGCTGTA CTTCCTGCCG ATGGCGTGAA AGCTATATTG GATCTTGCAA AGGTCGGTCC CGACTATCAG CCGGGACATG CGCATGCCGA CACATTGAGT TTTGAGTTAA GCGTCTTTGG AAAACGCTTA GTAGTCAATT CCGGAACTTC TCAGTACGGT GATGACTCTG AGCGACAAAG GCAGCGTGGT ACTGCGGCGC ATAATACGGT GGGATTGCTT GGCTATGATT CCTCTGAAGT TTGGGCGGGA TTTCGCGTTG CAAGGCGTGC GGCAGTAGTA ATTGAGCGAT TCGAGGTTGA ACCTGAAATA ACCTGTATTC AGGCCAGCCA TGATGGATAT GGAAGGCTTG TGAAGGGGCT ACGGCATCGT CGCACCTGGA CCTTCACTCG TACGAGTATG GAAATTTTCG ATAGCATAAC AGGTGATCAG GTTGTGGCTA CTTCTCGATT CTTCTTTAGT CCAGAAGTAA AGGTTTCTAT GAAGGCCGAT GGATTTGTTG CCGATATGGG GGCGGGAAAG AAAGTCTCTA TCGATTTCTC GGGAAGTGAT GATGTTCGTT TGATTTCTTC AACGTGGCAT CCGGAGTTTG GGTGTTCATT GGCCAATCAG TGTCTCGTGG CGACTTTTAG TGGTGATTCG CTGACTACTC GTATTTGCTG GGGTGGAATT TGA
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Protein sequence | MALQKLVRLY HTLRYLRLKQ IIFRVYYRFA QVRVHIYRNV AVRRWRRDWS APSWRNLSTN DAVEFTFLGI TGKVQCPEDW QADRSSKLWL YNLHYLDDLN ARDIGSQPGL ADKLIQSWIQ ANPPVSGEGW EPYPLSLRIV NLVKWLARHD ERSTFLADSL AVQADALVQQ VEYHILGNHL FANGKALVFA GAYLSGAMAD RWLAKGLRIL DEELPEQFLN DGGHFELSPM YHATLLWDMC DLVNLSTRSG LPDLAERLPQ WREVVVQGLK WLRSMQHPDG RISFFNDAAF GIAPEYEDIA AYAKRLDISP PAHENHLAAI YNSATGYAAV LPADGVKAIL DLAKVGPDYQ PGHAHADTLS FELSVFGKRL VVNSGTSQYG DDSERQRQRG TAAHNTVGLL GYDSSEVWAG FRVARRAAVV IERFEVEPEI TCIQASHDGY GRLVKGLRHR RTWTFTRTSM EIFDSITGDQ VVATSRFFFS PEVKVSMKAD GFVADMGAGK KVSIDFSGSD DVRLISSTWH PEFGCSLANQ CLVATFSGDS LTTRICWGGI
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