Gene CPR_0460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0460 
Symbol 
ID4205393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp545657 
End bp547540 
Gene Length1884 bp 
Protein Length627 aa 
Translation table11 
GC content22% 
IMG OID642565017 
Productheparinase II/III-like protein 
Protein accessionYP_697789 
Protein GI110802128 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00058619 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATAA AGTGGTTATT TAATAGATTT AGAAAAATGA GTTTAAAAGA AATTAAATAT 
AGGCTTAAAG TAAAGCGTTT TGATGGGAAA ATTAAAAAAG GATATACTAT TAGTATTAAA
GATAGGAATA TGAATTTTTT TCATATAAAT AAAGCTTGTT TTTGTGAAAA AACAAAAAAA
GATATAAAAA AATATGCAGA AGAAATATTA AGTGGTAATT ATGATATTTT TAATGAAAAA
GTAAATTTGA ATAATGAAAA TTTATTCTTT TTAGATCAAA TTAATAATTT TAAATGGGAT
AATAATAAAT ATAGTGATAT TAATATTATT AATAAAGTAG GAGATGCAAA AATAATACTA
GAAATAAATA AGCAACAATA TTTATTAGAT TTAGCTTTGG CATATATAGT TACTAATGAA
TCTAAGTACT ATTATAAAGT TGTAGATGAA ATTTTAAGAT GGATAAATGA TTGTAACAAT
TATATTGGAC CAGGATGGAA AAGTGGACTT GAAATTGGGT TAAGATGTTT AAGTTGGATG
TATTCATTAT CAATAATTAA TTGTGAAAAT GAGTTAAAGT ATGAAGAGAA ATTAAAAATA
TTAGATTCTT TAATAGAGCA AGCAGATTTT GTTTATAATA GACTATCCTT ATTTTCATCA
GCAAATAACC ATTTAGTTGG AGAAGCAGCA TTCTTATTAC ATGTAAGTTT TTTTGTTAAT
TGTAATAGAA GTGATAAGTG GAGAATACGT GCTATAAAAA TATTAAATGA ACAAATAAAC
AATCAATTTT TTGATGATGG AGTTAATAAA GAACAATCGA TAAATTATCA ACTACATACA
ATGGAATTAT ATTTTTTAAG TCAAAATTTA TTAAATATTA ATGATATGTC CTTAGATAAT
AAATGTTTAG AAATTTTAAA AAATTCATGT AGGTATATTC TTTGTATTTC TGAAAAAGAT
GGAAGTTATT TTAATATTGG AGATGAAGAT GGGGGAGAGA TTCTTAGGTT TAGAGTTGAA
GATAATAAAG TTAATTCATT ACTAAGTTGT GCAGAAGATG TTTTGAATGT AAGTATTGAT
AGAAAGTTAT ATTCTAATGT TAAAGATAAA CTTATTTATA AAGTTAATGA GTTAGAAAAG
TTTGAAGTAA TATCTGAAAA TAATACTAAC ATTTTTCGCA ATGGAGGAAT GTTAGTTAAA
AATTTATATT TTAATAATAA AAAATATAAG ATTAGCTTTG ATTTTGGAGA GTGTGGATTA
AGTCCATTAT ATGCACATGC GCATTCAGAT TTATTTTCTT TTAATTTAAA TATAAATGGG
AAGCCTATTT TTATTGATTG TGGTACATAT AAATATCATA ATTCTAATGG TTTAAGAGAT
TATTTTAGAA GTAGTATAGC ACATAATACA ATTTCAATAA ATGAAAAAGA TCATATTGAA
TTTCTAGGAA ATTTCATGTG TAATAAAAGT CCAAAATGTT TAATATTAGA TATAAATAAA
AATATGATAA GTTGCTTTTC TGATTCATAT AAAAATATTA AATGTGGTAT ATTTAGAACT
TTAGAGTTTA ATAATACTCA TTTATTAATA AAAGATAGAG TGGAGAATAA TTCAAATAAA
GATGTTGAAT TAAAGCAATA TTTTAATTTA GATTCAACGT GTAGAATTCA CTTACAAGAC
AATAAATCTT TTAATATTAA TAATCAAATA AAATTGATTT TAGGAAATAT TGATAGTTTT
GAGGTTGTAA ATGGTGATTC TAATCTTAAT ATAGGGCTAC AATCGCCTAG ATATAATATA
TTATGCAATA CAAATATAAT TATTACTAAG ACTAAAGTTG AAAAAAATTC TACAAAGAAT
ATAGTTACTA AGTTAATGTT ATAG
 
Protein sequence
MDIKWLFNRF RKMSLKEIKY RLKVKRFDGK IKKGYTISIK DRNMNFFHIN KACFCEKTKK 
DIKKYAEEIL SGNYDIFNEK VNLNNENLFF LDQINNFKWD NNKYSDINII NKVGDAKIIL
EINKQQYLLD LALAYIVTNE SKYYYKVVDE ILRWINDCNN YIGPGWKSGL EIGLRCLSWM
YSLSIINCEN ELKYEEKLKI LDSLIEQADF VYNRLSLFSS ANNHLVGEAA FLLHVSFFVN
CNRSDKWRIR AIKILNEQIN NQFFDDGVNK EQSINYQLHT MELYFLSQNL LNINDMSLDN
KCLEILKNSC RYILCISEKD GSYFNIGDED GGEILRFRVE DNKVNSLLSC AEDVLNVSID
RKLYSNVKDK LIYKVNELEK FEVISENNTN IFRNGGMLVK NLYFNNKKYK ISFDFGECGL
SPLYAHAHSD LFSFNLNING KPIFIDCGTY KYHNSNGLRD YFRSSIAHNT ISINEKDHIE
FLGNFMCNKS PKCLILDINK NMISCFSDSY KNIKCGIFRT LEFNNTHLLI KDRVENNSNK
DVELKQYFNL DSTCRIHLQD NKSFNINNQI KLILGNIDSF EVVNGDSNLN IGLQSPRYNI
LCNTNIIITK TKVEKNSTKN IVTKLML