Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0460 |
Symbol | |
ID | 4205393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 545657 |
End bp | 547540 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 22% |
IMG OID | 642565017 |
Product | heparinase II/III-like protein |
Protein accession | YP_697789 |
Protein GI | 110802128 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00058619 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATAA AGTGGTTATT TAATAGATTT AGAAAAATGA GTTTAAAAGA AATTAAATAT AGGCTTAAAG TAAAGCGTTT TGATGGGAAA ATTAAAAAAG GATATACTAT TAGTATTAAA GATAGGAATA TGAATTTTTT TCATATAAAT AAAGCTTGTT TTTGTGAAAA AACAAAAAAA GATATAAAAA AATATGCAGA AGAAATATTA AGTGGTAATT ATGATATTTT TAATGAAAAA GTAAATTTGA ATAATGAAAA TTTATTCTTT TTAGATCAAA TTAATAATTT TAAATGGGAT AATAATAAAT ATAGTGATAT TAATATTATT AATAAAGTAG GAGATGCAAA AATAATACTA GAAATAAATA AGCAACAATA TTTATTAGAT TTAGCTTTGG CATATATAGT TACTAATGAA TCTAAGTACT ATTATAAAGT TGTAGATGAA ATTTTAAGAT GGATAAATGA TTGTAACAAT TATATTGGAC CAGGATGGAA AAGTGGACTT GAAATTGGGT TAAGATGTTT AAGTTGGATG TATTCATTAT CAATAATTAA TTGTGAAAAT GAGTTAAAGT ATGAAGAGAA ATTAAAAATA TTAGATTCTT TAATAGAGCA AGCAGATTTT GTTTATAATA GACTATCCTT ATTTTCATCA GCAAATAACC ATTTAGTTGG AGAAGCAGCA TTCTTATTAC ATGTAAGTTT TTTTGTTAAT TGTAATAGAA GTGATAAGTG GAGAATACGT GCTATAAAAA TATTAAATGA ACAAATAAAC AATCAATTTT TTGATGATGG AGTTAATAAA GAACAATCGA TAAATTATCA ACTACATACA ATGGAATTAT ATTTTTTAAG TCAAAATTTA TTAAATATTA ATGATATGTC CTTAGATAAT AAATGTTTAG AAATTTTAAA AAATTCATGT AGGTATATTC TTTGTATTTC TGAAAAAGAT GGAAGTTATT TTAATATTGG AGATGAAGAT GGGGGAGAGA TTCTTAGGTT TAGAGTTGAA GATAATAAAG TTAATTCATT ACTAAGTTGT GCAGAAGATG TTTTGAATGT AAGTATTGAT AGAAAGTTAT ATTCTAATGT TAAAGATAAA CTTATTTATA AAGTTAATGA GTTAGAAAAG TTTGAAGTAA TATCTGAAAA TAATACTAAC ATTTTTCGCA ATGGAGGAAT GTTAGTTAAA AATTTATATT TTAATAATAA AAAATATAAG ATTAGCTTTG ATTTTGGAGA GTGTGGATTA AGTCCATTAT ATGCACATGC GCATTCAGAT TTATTTTCTT TTAATTTAAA TATAAATGGG AAGCCTATTT TTATTGATTG TGGTACATAT AAATATCATA ATTCTAATGG TTTAAGAGAT TATTTTAGAA GTAGTATAGC ACATAATACA ATTTCAATAA ATGAAAAAGA TCATATTGAA TTTCTAGGAA ATTTCATGTG TAATAAAAGT CCAAAATGTT TAATATTAGA TATAAATAAA AATATGATAA GTTGCTTTTC TGATTCATAT AAAAATATTA AATGTGGTAT ATTTAGAACT TTAGAGTTTA ATAATACTCA TTTATTAATA AAAGATAGAG TGGAGAATAA TTCAAATAAA GATGTTGAAT TAAAGCAATA TTTTAATTTA GATTCAACGT GTAGAATTCA CTTACAAGAC AATAAATCTT TTAATATTAA TAATCAAATA AAATTGATTT TAGGAAATAT TGATAGTTTT GAGGTTGTAA ATGGTGATTC TAATCTTAAT ATAGGGCTAC AATCGCCTAG ATATAATATA TTATGCAATA CAAATATAAT TATTACTAAG ACTAAAGTTG AAAAAAATTC TACAAAGAAT ATAGTTACTA AGTTAATGTT ATAG
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Protein sequence | MDIKWLFNRF RKMSLKEIKY RLKVKRFDGK IKKGYTISIK DRNMNFFHIN KACFCEKTKK DIKKYAEEIL SGNYDIFNEK VNLNNENLFF LDQINNFKWD NNKYSDINII NKVGDAKIIL EINKQQYLLD LALAYIVTNE SKYYYKVVDE ILRWINDCNN YIGPGWKSGL EIGLRCLSWM YSLSIINCEN ELKYEEKLKI LDSLIEQADF VYNRLSLFSS ANNHLVGEAA FLLHVSFFVN CNRSDKWRIR AIKILNEQIN NQFFDDGVNK EQSINYQLHT MELYFLSQNL LNINDMSLDN KCLEILKNSC RYILCISEKD GSYFNIGDED GGEILRFRVE DNKVNSLLSC AEDVLNVSID RKLYSNVKDK LIYKVNELEK FEVISENNTN IFRNGGMLVK NLYFNNKKYK ISFDFGECGL SPLYAHAHSD LFSFNLNING KPIFIDCGTY KYHNSNGLRD YFRSSIAHNT ISINEKDHIE FLGNFMCNKS PKCLILDINK NMISCFSDSY KNIKCGIFRT LEFNNTHLLI KDRVENNSNK DVELKQYFNL DSTCRIHLQD NKSFNINNQI KLILGNIDSF EVVNGDSNLN IGLQSPRYNI LCNTNIIITK TKVEKNSTKN IVTKLML
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