9 homologs were found in PanDaTox collection
for query gene Pmen_0960 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009439  Pmen_0960  Tfp pilus assembly protein PilW-like protein  100 
 
 		 282 aa  578  1e-164  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  0.775575 
 
 
-
 
NC_008463  PA14_60290  type 4 fimbrial biogenesis protein PilW  40.77 
 
 		 275 aa  186  4e-46  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  hitchhiker  0.000000623405 
 
 
-
 
NC_009656  PSPA7_5192  type 4 fimbrial biogenesis protein PilW  40.68 
 
 		 274 aa  186  5e-46  Pseudomonas aeruginosa PA7  Bacteria  normal  0.25172  n/a   
 
 
-
 
NC_010002  Daci_2883  Tfp pilus assembly protein PilW-like protein  30.5 
 
 		 264 aa  118  9.999999999999999e-26  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.932772 
 
 
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NC_007963  Csal_0491  Tfp pilus assembly protein PilW-like protein  24.82 
 
 		 226 aa  55.5  0.000001  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_007498  Pcar_2157  hypothetical protein  21.11 
 
 		 346 aa  54.3  0.000002  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000787973  n/a   
 
 
-
 
NC_008825  Mpe_A2942  fimbrial biogenesis protein  35.23 
 
 		 227 aa  46.6  0.0005  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.661552 
 
 
-
 
NC_011071  Smal_1380  hypothetical protein  29.91 
 
 		 385 aa  44.7  0.002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.175236  normal  1 
 
 
-
 
NC_011901  Tgr7_3227  hypothetical protein  23.39 
 
 		 341 aa  44.7  0.002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
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