| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2883 |
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| Symbol | |
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| ID | 5748464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3162605 |
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| End bp | 3163399 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641297983 |
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| Product | Tfp pilus assembly protein PilW-like protein |
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| Protein accession | YP_001563906 |
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| Protein GI | 160898324 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.932772 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCATGC CGTCCCAGGC GGGCATGTCC CTGGTGGAGA TTATGGTGGC GCTGGCCATC
GGCCTGTTCC TCGTGCTGAT TGCCACCACC ATCTACATGC AGGGGCTGTC GAGCTTCGGT
TTTCGCGTGG GGCAGAGCGA GAACCTCGGC AACAGCCGGC TGGCGCTTGC CGTGCTGGAC
TCCGAGTTCT CCAAGGCAGG CTACAGGAGA GACCCTTCGC AGGCGATGTT CGACGCATTT
CCTGCCGATT CCTCGCCCCA TCCCAACGGC TGCCAGTTCG CCCAGGGACA GGCGCTCTAC
GCGGCTGACG TGCAGAGCAT CTGCCTTCGC TTCCAGCCCC GGGACGCTGC GGAAACCGAT
TGTGCGGGCA CGCCGGCGAA CCTGGGAGCC GCCGGCCCCT ATGACGCTCC GGCGCCGGCG
ACAGGCATGT TCGCGGAGAA ATACACCGTC GAAAGTGGTG TGCTGGTCTG CCGGGCCGCG
CAGGAGGTTG TGCCGCTCGC CGATGGCGTG CGGGCGGTGC ATTTCGAGTT CGGCATCGAT
CGGCAGACAG CGCCTGGCGC GATACGCAGG GTCGATGCCT TCGCGGCCAC GTTGCCCGGG
CAGCAGGAAG CCATCCGTTC CCTGCGCCTT GCCCTCTTGC TGGAAAGCTC CGGCAAGGTG
ACGCAGGGCA TGGCCTCCAC CGTCTGCGAG CGTTGGGCGC AACTGGGCGG CGCTCCGGAC
CGATGCGATG CGAATGCCGG CCCCCTGCTG CAACTGGCCA CCGGCACGCT CACCCTGAGG
AATCTGATGC CATGA
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| Protein sequence | MRMPSQAGMS LVEIMVALAI GLFLVLIATT IYMQGLSSFG FRVGQSENLG NSRLALAVLD
SEFSKAGYRR DPSQAMFDAF PADSSPHPNG CQFAQGQALY AADVQSICLR FQPRDAAETD
CAGTPANLGA AGPYDAPAPA TGMFAEKYTV ESGVLVCRAA QEVVPLADGV RAVHFEFGID
RQTAPGAIRR VDAFAATLPG QQEAIRSLRL ALLLESSGKV TQGMASTVCE RWAQLGGAPD
RCDANAGPLL QLATGTLTLR NLMP
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