| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2942 |
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| Symbol | pilW |
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| ID | 4784364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 3125984 |
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| End bp | 3126667 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640091513 |
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| Product | fimbrial biogenesis protein |
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| Protein accession | YP_001022130 |
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| Protein GI | 124268126 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.661552 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGACG CACGGATGTC CCGGCGGAGA AATCTCGCGT CCCAGCGCGG CCTGTCGCTG
GTCGAACTGC TCGTCGGCTT CGCGGTCGCG CTCTTCGTTG TCATCGGCAG CATCGCCCTG
CTCGTCGACC AGTTGCGCGA CAGCCGCCGC CTGTTGCTCG AGGCGCGCGT TCACCAGGAT
CTGCGGGCCG CGGCTGATCT GATCACGCGC GATCTGCGCC GTGCCGGCTA CTGGCAGCAC
GCGCCAGCCG GCGGGGCCAA CCCGTACGAG GAAGTCACGA CGGCCGGTCC CGAGACCGCG
GCGGTCGTGC GCTACAGCTT TTCTCGCGAC GCTCTCGAGA ACGACAGCGT CGATACCGCG
GAGGCCACCG GCTTCCGACT CGGCGGAGAC ACGTTGCAGA CGCTGAACGG AGGAAGCTGG
CAGGCGATGA CCGACCCCGG CACCGTGCGC ATCACGCATT TTTCGATCAG CCCGCGGGTC
AGCGTCGTCC CGCTCGGCCA GTTCTGCATG CCGGCCTGCG CGGTCGGCAC GGCGGGCTGC
CCCGTGCTGT CGCTGCGCAG CTACGTGATC GAGTTGCGCG GGCGCTCCGC GACCGACGCC
GCCGTGCAGC GCGAGATCCG GCAGACCGTG CGCGTTCGCA ACGATGCGCT GCCGATCGGG
TCCTGTCCCG CCCCGACCAC ATGA
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| Protein sequence | MADARMSRRR NLASQRGLSL VELLVGFAVA LFVVIGSIAL LVDQLRDSRR LLLEARVHQD
LRAAADLITR DLRRAGYWQH APAGGANPYE EVTTAGPETA AVVRYSFSRD ALENDSVDTA
EATGFRLGGD TLQTLNGGSW QAMTDPGTVR ITHFSISPRV SVVPLGQFCM PACAVGTAGC
PVLSLRSYVI ELRGRSATDA AVQREIRQTV RVRNDALPIG SCPAPTT
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