| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_60290 |
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| Symbol | pilW |
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| ID | 4385725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 5371711 |
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| End bp | 5372538 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639327463 |
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| Product | type 4 fimbrial biogenesis protein PilW |
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| Protein accession | YP_793012 |
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| Protein GI | 116052696 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000000623405 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGAACAA GCATGCTCTT CAGCAAAATG CAGAAAGGCC TATCGATGGT AGAACTGCTC
GTGGCACTCG CTATAAGCAG CTTCCTGATC CTGGGGATCA GCCAGATCTA CATCGACAAC
AAACGCAACT ATCTTTTCCA GCAAGGCCAG GCCGGCAACC AGGAAAATAG CCGCTTCGTT
CTTATGCTGC TGCAGCAACA ACTGGATAAG ACAGCCTATC GTCGCCTTCA CGACGACAAC
ATGGAGAATG CTTTCAAATC CGCGACATTC AATGGCTGTC GTGCATTTGT GGCTGGCGAG
ACTATCGCTG CGGCAACTGC CCTCAAGGCG GGTGAGTACG GTGTCTGCTT GCGCTATCAA
CCCGCCTACA AAGGGGAGCA TGATTGCCTC GGTAATGAAA TTACCGGAGT TCCGGAAAAG
CCCTTCACAA ATACTCCCCC TGTCGTCGTT CGCCTGGTCT ACCTACCGAG CGCCGGTACC
CTGAGTTGCA GTCGTCCCGA TATCGCCCAG TCGAAATCGG GAGAATTGGT CAGTGGTCTC
ACAGACTTCC GCTTGGAAGC GGGGGTCGGG CCAGCAGATC GTAGCGAACG CAAAGTATCC
AGCTTCGTCG CACTACAGGA TGTCGCCGGT CGTCCTATCC GAGCATTGCG CTTCTCAATC
CTGGCAGGCA GCGACAATAC AAGCCTGCGC ACAGGAGATG ATAGCCAGGC ACGCGATCGC
TGGATCGTCC TTTATCCCGA GAGCAAAAGC GCCATCGAGG CCGCAGACAA AGGCCAGATT
TACCAAATAG CGCGTGGTAA CCAAACCATC AGGAATCTCA TGCCATGA
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| Protein sequence | MRTSMLFSKM QKGLSMVELL VALAISSFLI LGISQIYIDN KRNYLFQQGQ AGNQENSRFV
LMLLQQQLDK TAYRRLHDDN MENAFKSATF NGCRAFVAGE TIAAATALKA GEYGVCLRYQ
PAYKGEHDCL GNEITGVPEK PFTNTPPVVV RLVYLPSAGT LSCSRPDIAQ SKSGELVSGL
TDFRLEAGVG PADRSERKVS SFVALQDVAG RPIRALRFSI LAGSDNTSLR TGDDSQARDR
WIVLYPESKS AIEAADKGQI YQIARGNQTI RNLMP
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