| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5192 |
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| Symbol | pilW |
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| ID | 5356265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 5338062 |
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| End bp | 5338886 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640814238 |
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| Product | type 4 fimbrial biogenesis protein PilW |
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| Protein accession | YP_001350524 |
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| Protein GI | 152989332 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.25172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATGA TCAACCGCTC CCGACGGCAA TCGGGCCTGT CCATGATCGA ATTGCTGGTG
GCCCTGGCCA TCAGCAGCTT CCTGATCCTC GGGATCACCC AGATCTACCT GGACAACAAG
CGCAACTACC TGTTCCAGCA AGGCCAGGCC GGCAACCAGG AGAACGGCCG CTTCGCCATG
ATGTTCCTCG ACCAGCAACT GGCCAAGGTC GGCTTCCGCC GGCGCGCGGA CGACCCCAAC
GAGTTCGCCT TCAAAGCGCT GGCCAAGTCC GCGTTTTGCG AGGAGTTCAA GGCCGGCGCC
ACCCTGGTGC CCGCGGTGAC CAAGAGCGGC CAGAGCGGGT TCTGCTACCG CTACCAGCCG
GCCCCCGGCG AGGCGTACGA CTGCGAAGGC AATTCGATCA GCACGCCCAG CGATCCATTC
GGGACTGCCG ATGCCATCAC CGCCCGCATT CTCTTCATTC CCCCCACCGC CGATGCTCCC
GGGACGCTCA CCTGCTCCGC GCAGACAATC AAGTTAAACG GCCAGGAGAT CGTCAGCGGC
CTGGTCGATT TCAAGCTGGA ATATGGCGTC GGCCCGACCA TGGTCGGCAA GCGCGAGGTG
GAGGGTTTCG TCGAACAGGC CAATATCGCC GGCCGGCCGG TCCGGGCGCT GCGCTACTCC
GCCCTGATGG CCAGCGACAA GAACCTGCGC CAGGGCGACA GCAAGACGCT GGACGACTGG
ATCGCCCTCT ATCCCGCCTC CAGGACCAGC CTGCAGGACA ACGACAAGGA CCGCCTCTAC
CAGATCGCCC AGGGCAGCCA GACACTCAGG AACCTCGTGC CATGA
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| Protein sequence | MSMINRSRRQ SGLSMIELLV ALAISSFLIL GITQIYLDNK RNYLFQQGQA GNQENGRFAM
MFLDQQLAKV GFRRRADDPN EFAFKALAKS AFCEEFKAGA TLVPAVTKSG QSGFCYRYQP
APGEAYDCEG NSISTPSDPF GTADAITARI LFIPPTADAP GTLTCSAQTI KLNGQEIVSG
LVDFKLEYGV GPTMVGKREV EGFVEQANIA GRPVRALRYS ALMASDKNLR QGDSKTLDDW
IALYPASRTS LQDNDKDRLY QIAQGSQTLR NLVP
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