| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3227 |
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| Symbol | |
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| ID | 7315600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 3376823 |
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| End bp | 3377848 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643618126 |
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| Product | hypothetical protein |
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| Protein accession | YP_002515282 |
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| Protein GI | 220936383 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAAGT TCCTTCGAAT TGAAACCAGA AAGATCTCCA TGAGACGCCA GAAGGGTCTG
TCCCTGGTCG AATTGATGGT CGCCATGGTG ATTGCCTTGA TCCTCACGGC GGGTGTGATC
AGCATCTTCG TTGGGTCCCA GACGGCCTAC AGGTTCAATG ACGCGATGTC TCGCGTGCAG
GAAAATGGGC GCTATGCCAT CAACGTGCTC AGCCATGATG TGCGAATGGC GGGCTACGCG
GGTTGTGCGC GGCCGGGTGC CGTGCCTATA TCCAATATAG CGAATCCGCC CACGCTTGGC
GATTTTGATC CGGCCTTACT GGTCGAAGGC ATGGACGATG TCTCCGCCGG CACAACCATT
GGAACCCGCC AGGTTGTGGC CGGTACCGAT GTCCTGATCC TGCGTGGAGG CAGCGATGCC
GTGGGTCAGC TCAACGCGCA AAAGGTCGAG AATGCAAATG CGCAGCTTGT TGCCAACGCC
GGCGGATGGG TGGCTGGCGA TGTCCTGATG GTGACCGACT GTACGGCGGT CGACATCTTC
AGAGCGACTA ACGTCTCTAG CGGTGCGAGC GGGACTACCA TCGCCCATGC ATCGAGCATG
AATACGCAAA ACTTCCTGTC GAAGGTCTAC TTCCAGGGCG CTGAAGTCAT GGCCTATCGG
GAGCGTTCCT ATTTCGTGGC GTTCCGGGAC GCCAATGCCC CCGTGCCCTC CCTGTACCGC
AGGGTGGGTC AGGCCAATTC GGAAGAACTG GTTGAGGGTG TGGAGGACCT GCAGATCCTC
TACGGTGTGG ATACGAGTGG TGACCAGCAG GTCGATACAT ATATGAATGC AGGGCAGGTC
GCAGCAGCGA ACCGCTGGCC GGACGTTCTG AGTGTCCGTC TGTCCATGCT GCTGGTCAGC
CCTGAGAACA ATGTGATCGA TGCGCCTCAA CAAATTACAT TCAACGGTGT CACCTTCACG
CCGGCAGACC GGCGGTTGAG GCAGATCGCC ACCACCACGA TTGGATTGAG AAACCGCCTG
CCATGA
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| Protein sequence | MGKFLRIETR KISMRRQKGL SLVELMVAMV IALILTAGVI SIFVGSQTAY RFNDAMSRVQ
ENGRYAINVL SHDVRMAGYA GCARPGAVPI SNIANPPTLG DFDPALLVEG MDDVSAGTTI
GTRQVVAGTD VLILRGGSDA VGQLNAQKVE NANAQLVANA GGWVAGDVLM VTDCTAVDIF
RATNVSSGAS GTTIAHASSM NTQNFLSKVY FQGAEVMAYR ERSYFVAFRD ANAPVPSLYR
RVGQANSEEL VEGVEDLQIL YGVDTSGDQQ VDTYMNAGQV AAANRWPDVL SVRLSMLLVS
PENNVIDAPQ QITFNGVTFT PADRRLRQIA TTTIGLRNRL P
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