More than 300 homologs were found in PanDaTox collection
for query gene Patl_3783 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009719  Plav_1624  acyl-CoA dehydrogenase domain-containing protein  74.2 
 
 
415 aa  651    Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.66758  normal 
 
 
-
 
NC_008228  Patl_3783  acyl-CoA dehydrogenase-like  100 
 
 
415 aa  865    Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1146  Acyl-CoA dehydrogenase-like  73.02 
 
 
431 aa  633  1e-180  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.848697  normal  0.83525 
 
 
-
 
NC_011004  Rpal_4526  acyl-CoA dehydrogenase domain protein  73.28 
 
 
423 aa  632  1e-180  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1248  acyl-CoA dehydrogenase-like  73.27 
 
 
423 aa  631  1e-180  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_1651  acyl-CoA dehydrogenase domain-containing protein  55.94 
 
 
409 aa  478  1e-134  Maricaulis maris MCS10  Bacteria  normal  normal  0.461889 
 
 
-
 
NC_007492  Pfl01_3651  Acyl-CoA dehydrogenase-like  54.21 
 
 
409 aa  441  9.999999999999999e-123  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0710553 
 
 
-
 
NC_002947  PP_2437  acyl-CoA dehydrogenase domain-containing protein  53.47 
 
 
414 aa  435  1e-121  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2474  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  54.21 
 
 
409 aa  437  1e-121  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.159264  normal  0.108403 
 
 
-
 
NC_013205  Aaci_0158  acyl-CoA dehydrogenase domain protein  54.75 
 
 
405 aa  437  1e-121  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.00409231  n/a   
 
 
-
 
NC_007802  Jann_2811  acyl-CoA dehydrogenase-like  51.11 
 
 
411 aa  436  1e-121  Jannaschia sp. CCS1  Bacteria  normal  0.368156  normal 
 
 
-
 
NC_010322  PputGB1_2082  acyl-CoA dehydrogenase domain-containing protein  53.71 
 
 
409 aa  436  1e-121  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_3063  acyl-CoA dehydrogenase domain-containing protein  52.97 
 
 
409 aa  432  1e-120  Pseudomonas putida W619  Bacteria  normal  0.0887975  normal 
 
 
-
 
NC_009512  Pput_3258  acyl-CoA dehydrogenase domain-containing protein  52.97 
 
 
409 aa  433  1e-120  Pseudomonas putida F1  Bacteria  normal  normal  0.384897 
 
 
-
 
NC_004578  PSPTO_2745  acyl-CoA dehydrogenase family protein  52.48 
 
 
409 aa  428  1e-119  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0925  acyl-CoA dehydrogenase domain protein  53.22 
 
 
401 aa  427  1e-118  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A3188  putative acyl-CoA dehydrogenase oxidoreductase  52.58 
 
 
419 aa  425  1e-118  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2439  acyl-CoA dehydrogenase domain-containing protein  52.23 
 
 
409 aa  424  1e-117  Pseudomonas mendocina ymp  Bacteria  normal  0.987595  normal 
 
 
-
 
NC_010681  Bphyt_1367  acyl-CoA dehydrogenase domain protein  52.35 
 
 
419 aa  419  1e-116  Burkholderia phytofirmans PsJN  Bacteria  normal  0.44038  hitchhiker  0.00184571 
 
 
-
 
NC_009656  PSPA7_2686  putative acyl-CoA dehydrogenase  51.98 
 
 
409 aa  421  1e-116  Pseudomonas aeruginosa PA7  Bacteria  normal  0.136892  n/a   
 
 
-
 
NC_008752  Aave_3077  acyl-CoA dehydrogenase domain-containing protein  50.73 
 
 
424 aa  420  1e-116  Acidovorax citrulli AAC00-1  Bacteria  normal  0.765136  normal  0.228122 
 
 
-
 
NC_008463  PA14_31580  putative acyl-CoA dehydrogenase  51.98 
 
 
409 aa  421  1e-116  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.00724554 
 
 
-
 
NC_008785  BMASAVP1_A1153  acyl-CoA dehydrogenase domain-containing protein  52.63 
 
 
408 aa  416  9.999999999999999e-116  Burkholderia mallei SAVP1  Bacteria  normal  0.0557082  n/a   
 
 
-
 
NC_008836  BMA10229_A0715  acyl-CoA dehydrogenase domain-containing protein  52.63 
 
 
408 aa  416  9.999999999999999e-116  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA1806  acyl-CoA dehydrogenase domain-containing protein  52.63 
 
 
408 aa  416  9.999999999999999e-116  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0379201  n/a   
 
 
-
 
NC_013411  GYMC61_1801  acyl-CoA dehydrogenase domain protein  53.09 
 
 
403 aa  416  9.999999999999999e-116  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011004  Rpal_3710  acyl-CoA dehydrogenase domain protein  53.16 
 
 
410 aa  416  9.999999999999999e-116  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1459  acyl-CoA dehydrogenase domain-containing protein  52.63 
 
 
408 aa  415  9.999999999999999e-116  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1083  acyl-CoA dehydrogenase domain-containing protein  52.02 
 
 
408 aa  415  9.999999999999999e-116  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3285  acyl-CoA dehydrogenase domain-containing protein  51.46 
 
 
424 aa  416  9.999999999999999e-116  Delftia acidovorans SPH-1  Bacteria  normal  0.64464  normal  0.6296 
 
 
-
 
NC_012791  Vapar_2628  acyl-CoA dehydrogenase domain protein  50.6 
 
 
423 aa  418  9.999999999999999e-116  Variovorax paradoxus S110  Bacteria  normal  0.122301  n/a   
 
 
-
 
NC_009074  BURPS668_1313  acyl-CoA dehydrogenase domain-containing protein  52.63 
 
 
408 aa  415  9.999999999999999e-116  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1322  acyl-CoA dehydrogenase domain-containing protein  52.63 
 
 
408 aa  415  9.999999999999999e-116  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_0436  acyl-CoA dehydrogenase domain-containing protein  52.63 
 
 
408 aa  416  9.999999999999999e-116  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_1987  acyl-CoA dehydrogenase domain-containing protein  56.62 
 
 
412 aa  414  1e-114  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3328  acyl-CoA dehydrogenase-like  50 
 
 
416 aa  410  1e-113  Rhodoferax ferrireducens T118  Bacteria  normal  0.520188  n/a   
 
 
-
 
NC_007925  RPC_3482  acyl-CoA dehydrogenase-like  51.94 
 
 
412 aa  409  1e-113  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.468948  normal 
 
 
-
 
NC_007958  RPD_3210  acyl-CoA dehydrogenase-like  51.83 
 
 
412 aa  409  1e-113  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_2113  acyl-CoA dehydrogenase domain-containing protein  51.85 
 
 
426 aa  410  1e-113  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_1945  acyl-CoA dehydrogenase domain protein  48.79 
 
 
424 aa  405  1.0000000000000001e-112  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1953  putative acyl-CoA dehydrogenase family protein  47.95 
 
 
415 aa  407  1.0000000000000001e-112  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.134016 
 
 
-
 
NC_008148  Rxyl_2418  acyl-CoA dehydrogenase-like protein  50.25 
 
 
412 aa  407  1.0000000000000001e-112  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.185617  n/a   
 
 
-
 
NC_013440  Hoch_4197  acyl-CoA dehydrogenase domain protein  50.5 
 
 
405 aa  407  1.0000000000000001e-112  Haliangium ochraceum DSM 14365  Bacteria  normal  0.62553  normal  0.93763 
 
 
-
 
NC_009485  BBta_5105  putative acyl-CoA dehydrogenase  51.83 
 
 
411 aa  402  1e-111  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.117324  normal 
 
 
-
 
NC_003295  RSc2020  acyl-CoA dehydrogenase oxidoreductase protein  56.34 
 
 
420 aa  404  1e-111  Ralstonia solanacearum GMI1000  Bacteria  normal  0.245052  normal  0.152176 
 
 
-
 
NC_007347  Reut_A1002  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  52.19 
 
 
420 aa  402  1e-111  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_1911  acyl-CoA dehydrogenase domain-containing protein  51.24 
 
 
419 aa  403  1e-111  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.117323  normal 
 
 
-
 
NC_007778  RPB_2260  Acyl-CoA dehydrogenase-like  51.34 
 
 
410 aa  402  1e-111  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.716497  normal 
 
 
-
 
NC_011138  MADE_01061  putative acyl-CoA dehydrogenase  50.86 
 
 
411 aa  403  1e-111  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2961  acyl-CoA dehydrogenase-like  50.12 
 
 
419 aa  403  1e-111  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_0968  acyl-CoA dehydrogenase-like protein  53.23 
 
 
420 aa  402  1e-111  Cupriavidus metallidurans CH34  Bacteria  normal  0.0487857  normal  0.0424234 
 
 
-
 
NC_008010  Dgeo_2399  acyl-CoA dehydrogenase-like  51.6 
 
 
412 aa  403  1e-111  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.137171  n/a   
 
 
-
 
NC_011894  Mnod_4413  acyl-CoA dehydrogenase domain protein  52.49 
 
 
416 aa  402  1e-111  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_1777  acyl-CoA dehydrogenase domain-containing protein  48.79 
 
 
424 aa  404  1e-111  Acidovorax sp. JS42  Bacteria  normal  0.314845  normal 
 
 
-
 
NC_010511  M446_3408  acyl-CoA dehydrogenase domain-containing protein  52.54 
 
 
416 aa  402  1e-111  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.288256 
 
 
-
 
NC_009719  Plav_0646  acyl-CoA dehydrogenase domain-containing protein  55.21 
 
 
412 aa  399  9.999999999999999e-111  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_0996  acyl-CoA dehydrogenase-like  51.76 
 
 
430 aa  400  9.999999999999999e-111  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.286949  n/a   
 
 
-
 
NC_010505  Mrad2831_1819  acyl-CoA dehydrogenase domain-containing protein  54.44 
 
 
411 aa  398  9.999999999999999e-111  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0206829 
 
 
-
 
NC_008786  Veis_4306  acyl-CoA dehydrogenase domain-containing protein  48.54 
 
 
424 aa  400  9.999999999999999e-111  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.530471  normal 
 
 
-
 
NC_008048  Sala_3074  acyl-CoA dehydrogenase-like protein  52.24 
 
 
429 aa  395  1e-109  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_4071  acyl-CoA dehydrogenase domain-containing protein  50.95 
 
 
435 aa  393  1e-108  Caulobacter sp. K31  Bacteria  normal  0.796967  normal 
 
 
-
 
NC_012856  Rpic12D_1854  acyl-CoA dehydrogenase domain protein  54.78 
 
 
419 aa  394  1e-108  Ralstonia pickettii 12D  Bacteria  normal  0.505719  normal  0.0689875 
 
 
-
 
NC_010682  Rpic_2177  acyl-CoA dehydrogenase domain protein  54.78 
 
 
419 aa  394  1e-108  Ralstonia pickettii 12J  Bacteria  normal  0.556942  normal  0.0164112 
 
 
-
 
NC_010552  BamMC406_3221  acyl-CoA dehydrogenase domain-containing protein  54.19 
 
 
414 aa  392  1e-108  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_1812  acyl-CoA dehydrogenase-like  49.38 
 
 
408 aa  394  1e-108  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2214  acyl-CoA dehydrogenase domain-containing protein  49.11 
 
 
406 aa  393  1e-108  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_5081  acyl-CoA dehydrogenase domain-containing protein  54.29 
 
 
414 aa  393  1e-108  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1860  acyl-CoA dehydrogenase domain protein  50.51 
 
 
407 aa  389  1e-107  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.51043  n/a   
 
 
-
 
NC_009092  Shew_2860  acyl-CoA dehydrogenase domain-containing protein  50.12 
 
 
432 aa  389  1e-107  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_2511  acyl-CoA dehydrogenase-like  47.51 
 
 
408 aa  387  1e-106  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2069  acyl-CoA dehydrogenase domain-containing protein  50.12 
 
 
403 aa  386  1e-106  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_4335  acyl-CoA dehydrogenase domain-containing protein  53.06 
 
 
414 aa  383  1e-105  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0735838  normal  0.987341 
 
 
-
 
NC_013510  Tcur_4020  acyl-CoA dehydrogenase domain protein  48.02 
 
 
402 aa  384  1e-105  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.00340941  n/a   
 
 
-
 
NC_007511  Bcep18194_B3035  Acyl-CoA dehydrogenase  53.78 
 
 
414 aa  384  1e-105  Burkholderia sp. 383  Bacteria  normal  0.0562026  normal  0.845573 
 
 
-
 
NC_012792  Vapar_6158  acyl-CoA dehydrogenase domain protein  48.75 
 
 
410 aa  382  1e-105  Variovorax paradoxus S110  Bacteria  normal  0.870392  n/a   
 
 
-
 
NC_008061  Bcen_5016  acyl-CoA dehydrogenase-like  53.22 
 
 
414 aa  382  1e-105  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.605306  n/a   
 
 
-
 
NC_008740  Maqu_2205  acyl-CoA dehydrogenase domain-containing protein  47.16 
 
 
403 aa  382  1e-105  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0635  acyl-CoA dehydrogenase-like  49.75 
 
 
406 aa  384  1e-105  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5844  acyl-CoA dehydrogenase domain-containing protein  53.22 
 
 
414 aa  382  1e-105  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0983385  normal 
 
 
-
 
NC_009953  Sare_1511  acyl-CoA dehydrogenase domain-containing protein  49.87 
 
 
403 aa  380  1e-104  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.000569336 
 
 
-
 
NC_010086  Bmul_5271  acyl-CoA dehydrogenase domain-containing protein  53.35 
 
 
414 aa  380  1e-104  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.166824  normal 
 
 
-
 
NC_014210  Ndas_2921  acyl-CoA dehydrogenase domain protein  50 
 
 
403 aa  377  1e-103  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.296233 
 
 
-
 
NC_009338  Mflv_0734  acyl-CoA dehydrogenase domain-containing protein  48.02 
 
 
418 aa  375  1e-103  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.998726  normal 
 
 
-
 
NC_009355  OSTLU_40224  predicted protein  49.74 
 
 
461 aa  374  1e-102  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  n/a   
 
 
-
 
NC_013510  Tcur_2090  acyl-CoA dehydrogenase domain protein  51.4 
 
 
407 aa  374  1e-102  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0739056  n/a   
 
 
-
 
NC_013093  Amir_3461  acyl-CoA dehydrogenase domain protein  48.61 
 
 
402 aa  369  1e-101  Actinosynnema mirum DSM 43827  Bacteria  normal  0.274426  n/a   
 
 
-
 
NC_009380  Strop_1562  acyl-CoA dehydrogenase domain-containing protein  49.35 
 
 
403 aa  370  1e-101  Salinispora tropica CNB-440  Bacteria  normal  normal  0.469679 
 
 
-
 
NC_014165  Tbis_2699  acyl-CoA dehydrogenase domain-containing protein  51.4 
 
 
404 aa  365  1e-100  Thermobispora bispora DSM 43833  Bacteria  normal  0.401579  normal  0.61 
 
 
-
 
NC_010623  Bphy_5044  acyl-CoA dehydrogenase domain-containing protein  48.12 
 
 
416 aa  365  1e-100  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_10155  acyl-CoA dehydrogenase fadE2  52.56 
 
 
403 aa  368  1e-100  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1435  acyl-CoA dehydrogenase family protein  51.83 
 
 
400 aa  366  1e-100  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00297714  normal  0.111309 
 
 
-
 
NC_011138  MADE_00135  Acyl-CoA dehydrogenase  47.9 
 
 
406 aa  368  1e-100  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4008  acyl-CoA dehydrogenase domain protein  45.57 
 
 
402 aa  366  1e-100  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0116  acyl-CoA dehydrogenase domain-containing protein  47.03 
 
 
447 aa  367  1e-100  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1832  acyl-CoA dehydrogenase domain-containing protein  49.25 
 
 
411 aa  367  1e-100  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2485  acyl-CoA dehydrogenase  46.15 
 
 
398 aa  364  1e-99  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4575  acyl-CoA dehydrogenase domain protein  49.72 
 
 
407 aa  364  2e-99  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.879339 
 
 
-
 
NC_008699  Noca_3866  acyl-CoA dehydrogenase domain-containing protein  46.44 
 
 
407 aa  363  2e-99  Nocardioides sp. JS614  Bacteria  normal  0.196465  n/a   
 
 
-
 
NC_013595  Sros_7782  acyl-CoA dehydrogenase domain-containing protein  51.4 
 
 
401 aa  363  4e-99  Streptosporangium roseum DSM 43021  Bacteria  normal  0.711164  normal 
 
 
-
 
NC_007650  BTH_II0520  acyl-CoA dehydrogenase domain-containing protein  46.78 
 
 
410 aa  360  2e-98  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
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