Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3783 |
Symbol | |
ID | 4175563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4556839 |
End bp | 4558086 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638056811 |
Product | acyl-CoA dehydrogenase-like |
Protein accession | YP_663337 |
Protein GI | 109900082 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGACTG AAGATTTAAA CGATTTGCGT ATGTCAGAAG ATGTGCGTCC ACTTTACCTC GCTGTAAAGA AACACATTGA AGAGAATGTT ATCCCGATCC AAGAAGAGTT TTACTCAATT GGTGAGAAGC TTGCTGATCG TTGGAGTTAC TCTGATCGTC AAATGGAGTT ATTAGAAGGG GCCAAAAATA AAGCCAAAGA GGCTGGTCTT TGGAATTTCT TTCTGCCTGA TGCGGAAACA GGGCAAGGCC TAACGAATTT GGATTATGCC TATATTGCGG TTGAACTGGG TAAAGCTCCA CTCGCCTCTG AAACGTTAAA CTGTTCAGCG CCTGACACGG GCAACATGGA AGTGTTAGAG CGTGTCGGTA CACCTGAGCA GAAAGAAAAA TGGTTAAAGC CATTGCTACG AGGTGAAATA CGCTCTTGCT TTGGTATGAC AGAGCCTAAT GTTGCCTCTT CTGATGCGAA AAACATTTCA ACATTGGCGG TTGAAGATGG CGATGACTGG GTCATCAACG GTGAGAAGTA CTATATCTCT GGTGCCGGTG ACCCGCGTTG TAAAGTCATG ATCTGCATGG TGAAAAGCAG CCCTGATGCC CCTGCACACA AACAACAATC ACAAATTCTT GTGCCACTAG ACACCCCAGG TGTCACGATT GTTGGCCCAA TGCATGTCTT TGGGCATGAC CATGCTCCTC ATGGGCACAT GCACATCAAG CTTGAAAACG TACGGGTGCC TAAAACCAAT ATGTTGCTAG GTGAGGGCCG TGGTTTTGAA ATATCTCAAG TACGTTTAGG CCCAGGTCGT ATTCACCATT GCATGCGTTC AATTGGCCAA GCGGAAGAAG CGTTACAACT CGCACTTGAG CGCTCAACAA CAAGAGAAGC CTTCGGTAAA AAGATATATC AATTGGGTAA AAATGTTGAA GTCATCTCGA AGATGCGAAT CGACATTGAA GCCATGCGCA TGATGGTACT TAAAGCTGCT AAAGCCATGG ATGTATTGGG TAACCAAGAA GCCCGTATTT GGATCCACAT GATCAAAGCG ATGGTACCAG AGCGTGTATG TGAAATTATC GACCAATCCA TGCAAATGCA CGGGGCTACC GGTATTTCGC AGTGGTCACC GCTTTCTGCC ATGTACGCAG GCCAGCGCAC CTTGCGTTAC GCTGACGGCC CAGATGAGGT ACATCATATG GTGGTGGGGC GAAATGAAGT ACGTGAATAT GAGCGCAACA AGGGTTAA
|
Protein sequence | MSTEDLNDLR MSEDVRPLYL AVKKHIEENV IPIQEEFYSI GEKLADRWSY SDRQMELLEG AKNKAKEAGL WNFFLPDAET GQGLTNLDYA YIAVELGKAP LASETLNCSA PDTGNMEVLE RVGTPEQKEK WLKPLLRGEI RSCFGMTEPN VASSDAKNIS TLAVEDGDDW VINGEKYYIS GAGDPRCKVM ICMVKSSPDA PAHKQQSQIL VPLDTPGVTI VGPMHVFGHD HAPHGHMHIK LENVRVPKTN MLLGEGRGFE ISQVRLGPGR IHHCMRSIGQ AEEALQLALE RSTTREAFGK KIYQLGKNVE VISKMRIDIE AMRMMVLKAA KAMDVLGNQE ARIWIHMIKA MVPERVCEII DQSMQMHGAT GISQWSPLSA MYAGQRTLRY ADGPDEVHHM VVGRNEVREY ERNKG
|
| |