More than 300 homologs were found in PanDaTox collection
for query gene RPB_1146 on replicon NC_007778
Organism: Rhodopseudomonas palustris HaA2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_4526  acyl-CoA dehydrogenase domain protein  91.96 
 
 
423 aa  818    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1146  Acyl-CoA dehydrogenase-like  100 
 
 
431 aa  897    Rhodopseudomonas palustris HaA2  Bacteria  normal  0.848697  normal  0.83525 
 
 
-
 
NC_007958  RPD_1248  acyl-CoA dehydrogenase-like  92.2 
 
 
423 aa  816    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1624  acyl-CoA dehydrogenase domain-containing protein  75.8 
 
 
415 aa  640    Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.66758  normal 
 
 
-
 
NC_008228  Patl_3783  acyl-CoA dehydrogenase-like  73.02 
 
 
415 aa  633  1e-180  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_1651  acyl-CoA dehydrogenase domain-containing protein  56.61 
 
 
409 aa  474  1e-132  Maricaulis maris MCS10  Bacteria  normal  normal  0.461889 
 
 
-
 
NC_007802  Jann_2811  acyl-CoA dehydrogenase-like  53.23 
 
 
411 aa  451  1.0000000000000001e-126  Jannaschia sp. CCS1  Bacteria  normal  0.368156  normal 
 
 
-
 
NC_007005  Psyr_2474  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  55.11 
 
 
409 aa  437  1e-121  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.159264  normal  0.108403 
 
 
-
 
NC_013205  Aaci_0158  acyl-CoA dehydrogenase domain protein  54.86 
 
 
405 aa  434  1e-120  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.00409231  n/a   
 
 
-
 
NC_010322  PputGB1_2082  acyl-CoA dehydrogenase domain-containing protein  54.11 
 
 
409 aa  434  1e-120  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2437  acyl-CoA dehydrogenase domain-containing protein  53.62 
 
 
414 aa  430  1e-119  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3258  acyl-CoA dehydrogenase domain-containing protein  53.87 
 
 
409 aa  431  1e-119  Pseudomonas putida F1  Bacteria  normal  normal  0.384897 
 
 
-
 
NC_007492  Pfl01_3651  Acyl-CoA dehydrogenase-like  54.36 
 
 
409 aa  431  1e-119  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0710553 
 
 
-
 
NC_004578  PSPTO_2745  acyl-CoA dehydrogenase family protein  53.12 
 
 
409 aa  427  1e-118  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3285  acyl-CoA dehydrogenase domain-containing protein  52.08 
 
 
424 aa  422  1e-117  Delftia acidovorans SPH-1  Bacteria  normal  0.64464  normal  0.6296 
 
 
-
 
NC_009439  Pmen_2439  acyl-CoA dehydrogenase domain-containing protein  53.37 
 
 
409 aa  425  1e-117  Pseudomonas mendocina ymp  Bacteria  normal  0.987595  normal 
 
 
-
 
NC_007951  Bxe_A3188  putative acyl-CoA dehydrogenase oxidoreductase  53.1 
 
 
419 aa  422  1e-117  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_1987  acyl-CoA dehydrogenase domain-containing protein  53.35 
 
 
412 aa  424  1e-117  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_3063  acyl-CoA dehydrogenase domain-containing protein  52.62 
 
 
409 aa  425  1e-117  Pseudomonas putida W619  Bacteria  normal  0.0887975  normal 
 
 
-
 
NC_008825  Mpe_A1953  putative acyl-CoA dehydrogenase family protein  50.97 
 
 
415 aa  418  1e-116  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.134016 
 
 
-
 
NC_011004  Rpal_3710  acyl-CoA dehydrogenase domain protein  54.28 
 
 
410 aa  421  1e-116  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_1367  acyl-CoA dehydrogenase domain protein  52.85 
 
 
419 aa  420  1e-116  Burkholderia phytofirmans PsJN  Bacteria  normal  0.44038  hitchhiker  0.00184571 
 
 
-
 
NC_012793  GWCH70_0925  acyl-CoA dehydrogenase domain protein  53.25 
 
 
401 aa  420  1e-116  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3077  acyl-CoA dehydrogenase domain-containing protein  51.34 
 
 
424 aa  419  1e-116  Acidovorax citrulli AAC00-1  Bacteria  normal  0.765136  normal  0.228122 
 
 
-
 
NC_009656  PSPA7_2686  putative acyl-CoA dehydrogenase  53.12 
 
 
409 aa  418  1e-116  Pseudomonas aeruginosa PA7  Bacteria  normal  0.136892  n/a   
 
 
-
 
NC_008148  Rxyl_2418  acyl-CoA dehydrogenase-like protein  52.84 
 
 
412 aa  419  1e-116  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.185617  n/a   
 
 
-
 
NC_009719  Plav_0646  acyl-CoA dehydrogenase domain-containing protein  53.12 
 
 
412 aa  416  9.999999999999999e-116  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_31580  putative acyl-CoA dehydrogenase  53.12 
 
 
409 aa  418  9.999999999999999e-116  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.00724554 
 
 
-
 
NC_013411  GYMC61_1801  acyl-CoA dehydrogenase domain protein  53.25 
 
 
403 aa  412  1e-114  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008781  Pnap_1911  acyl-CoA dehydrogenase domain-containing protein  53.09 
 
 
419 aa  414  1e-114  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.117323  normal 
 
 
-
 
NC_012791  Vapar_2628  acyl-CoA dehydrogenase domain protein  50.86 
 
 
423 aa  413  1e-114  Variovorax paradoxus S110  Bacteria  normal  0.122301  n/a   
 
 
-
 
NC_009485  BBta_5105  putative acyl-CoA dehydrogenase  53.69 
 
 
411 aa  412  1e-114  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.117324  normal 
 
 
-
 
NC_007925  RPC_3482  acyl-CoA dehydrogenase-like  54.03 
 
 
412 aa  414  1e-114  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.468948  normal 
 
 
-
 
NC_006348  BMA1806  acyl-CoA dehydrogenase domain-containing protein  52.39 
 
 
408 aa  409  1e-113  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0379201  n/a   
 
 
-
 
NC_010505  Mrad2831_1819  acyl-CoA dehydrogenase domain-containing protein  56.62 
 
 
411 aa  409  1e-113  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0206829 
 
 
-
 
NC_008785  BMASAVP1_A1153  acyl-CoA dehydrogenase domain-containing protein  52.39 
 
 
408 aa  409  1e-113  Burkholderia mallei SAVP1  Bacteria  normal  0.0557082  n/a   
 
 
-
 
NC_007434  BURPS1710b_1459  acyl-CoA dehydrogenase domain-containing protein  52.39 
 
 
408 aa  408  1e-113  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1322  acyl-CoA dehydrogenase domain-containing protein  52.39 
 
 
408 aa  408  1e-113  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1083  acyl-CoA dehydrogenase domain-containing protein  52.64 
 
 
408 aa  411  1e-113  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4413  acyl-CoA dehydrogenase domain protein  52.81 
 
 
416 aa  410  1e-113  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_0996  acyl-CoA dehydrogenase-like  50.61 
 
 
430 aa  410  1e-113  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.286949  n/a   
 
 
-
 
NC_013440  Hoch_4197  acyl-CoA dehydrogenase domain protein  52.02 
 
 
405 aa  408  1e-113  Haliangium ochraceum DSM 14365  Bacteria  normal  0.62553  normal  0.93763 
 
 
-
 
NC_011138  MADE_01061  putative acyl-CoA dehydrogenase  51.85 
 
 
411 aa  410  1e-113  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2961  acyl-CoA dehydrogenase-like  51.85 
 
 
419 aa  408  1e-113  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3210  acyl-CoA dehydrogenase-like  52.96 
 
 
412 aa  409  1e-113  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008836  BMA10229_A0715  acyl-CoA dehydrogenase domain-containing protein  52.39 
 
 
408 aa  409  1e-113  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2860  acyl-CoA dehydrogenase domain-containing protein  52.87 
 
 
432 aa  409  1e-113  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009080  BMA10247_0436  acyl-CoA dehydrogenase domain-containing protein  52.39 
 
 
408 aa  409  1e-113  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1313  acyl-CoA dehydrogenase domain-containing protein  52.39 
 
 
408 aa  409  1e-113  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3408  acyl-CoA dehydrogenase domain-containing protein  52.32 
 
 
416 aa  409  1e-113  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.288256 
 
 
-
 
NC_007778  RPB_2260  Acyl-CoA dehydrogenase-like  52.71 
 
 
410 aa  407  1.0000000000000001e-112  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.716497  normal 
 
 
-
 
NC_007908  Rfer_3328  acyl-CoA dehydrogenase-like  50.86 
 
 
416 aa  405  1.0000000000000001e-112  Rhodoferax ferrireducens T118  Bacteria  normal  0.520188  n/a   
 
 
-
 
NC_011992  Dtpsy_1945  acyl-CoA dehydrogenase domain protein  49.63 
 
 
424 aa  405  1.0000000000000001e-112  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2020  acyl-CoA dehydrogenase oxidoreductase protein  51.62 
 
 
420 aa  404  1e-111  Ralstonia solanacearum GMI1000  Bacteria  normal  0.245052  normal  0.152176 
 
 
-
 
NC_007347  Reut_A1002  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  50.86 
 
 
420 aa  404  1e-111  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0968  acyl-CoA dehydrogenase-like protein  51.38 
 
 
420 aa  404  1e-111  Cupriavidus metallidurans CH34  Bacteria  normal  0.0487857  normal  0.0424234 
 
 
-
 
NC_008010  Dgeo_2399  acyl-CoA dehydrogenase-like  52.11 
 
 
412 aa  405  1e-111  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.137171  n/a   
 
 
-
 
NC_008782  Ajs_1777  acyl-CoA dehydrogenase domain-containing protein  49.63 
 
 
424 aa  405  1e-111  Acidovorax sp. JS42  Bacteria  normal  0.314845  normal 
 
 
-
 
NC_008786  Veis_4306  acyl-CoA dehydrogenase domain-containing protein  49.14 
 
 
424 aa  400  9.999999999999999e-111  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.530471  normal 
 
 
-
 
NC_009484  Acry_2113  acyl-CoA dehydrogenase domain-containing protein  52 
 
 
426 aa  400  9.999999999999999e-111  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_4071  acyl-CoA dehydrogenase domain-containing protein  52.05 
 
 
435 aa  400  9.999999999999999e-111  Caulobacter sp. K31  Bacteria  normal  0.796967  normal 
 
 
-
 
NC_008228  Patl_1812  acyl-CoA dehydrogenase-like  50.75 
 
 
408 aa  398  9.999999999999999e-111  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1854  acyl-CoA dehydrogenase domain protein  50.12 
 
 
419 aa  396  1e-109  Ralstonia pickettii 12D  Bacteria  normal  0.505719  normal  0.0689875 
 
 
-
 
NC_010682  Rpic_2177  acyl-CoA dehydrogenase domain protein  50.12 
 
 
419 aa  396  1e-109  Ralstonia pickettii 12J  Bacteria  normal  0.556942  normal  0.0164112 
 
 
-
 
NC_008345  Sfri_2069  acyl-CoA dehydrogenase domain-containing protein  52.5 
 
 
403 aa  396  1e-109  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_3074  acyl-CoA dehydrogenase-like protein  50.6 
 
 
429 aa  392  1e-108  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2090  acyl-CoA dehydrogenase domain protein  54.96 
 
 
407 aa  392  1e-108  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0739056  n/a   
 
 
-
 
NC_007794  Saro_2511  acyl-CoA dehydrogenase-like  50.76 
 
 
408 aa  390  1e-107  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_012792  Vapar_6158  acyl-CoA dehydrogenase domain protein  50 
 
 
410 aa  390  1e-107  Variovorax paradoxus S110  Bacteria  normal  0.870392  n/a   
 
 
-
 
NC_009953  Sare_1511  acyl-CoA dehydrogenase domain-containing protein  49.5 
 
 
403 aa  386  1e-106  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.000569336 
 
 
-
 
NC_013510  Tcur_4020  acyl-CoA dehydrogenase domain protein  50.25 
 
 
402 aa  387  1e-106  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.00340941  n/a   
 
 
-
 
NC_008740  Maqu_2205  acyl-CoA dehydrogenase domain-containing protein  50.12 
 
 
403 aa  384  1e-105  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B3035  Acyl-CoA dehydrogenase  50.12 
 
 
414 aa  377  1e-103  Burkholderia sp. 383  Bacteria  normal  0.0562026  normal  0.845573 
 
 
-
 
NC_008061  Bcen_5016  acyl-CoA dehydrogenase-like  49.88 
 
 
414 aa  375  1e-103  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.605306  n/a   
 
 
-
 
NC_013739  Cwoe_4575  acyl-CoA dehydrogenase domain protein  47.51 
 
 
407 aa  377  1e-103  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.879339 
 
 
-
 
NC_008391  Bamb_5081  acyl-CoA dehydrogenase domain-containing protein  49.38 
 
 
414 aa  375  1e-103  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_1562  acyl-CoA dehydrogenase domain-containing protein  49 
 
 
403 aa  378  1e-103  Salinispora tropica CNB-440  Bacteria  normal  normal  0.469679 
 
 
-
 
NC_008543  Bcen2424_5844  acyl-CoA dehydrogenase domain-containing protein  49.88 
 
 
414 aa  375  1e-103  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0983385  normal 
 
 
-
 
NC_013093  Amir_3461  acyl-CoA dehydrogenase domain protein  53.67 
 
 
402 aa  374  1e-102  Actinosynnema mirum DSM 43827  Bacteria  normal  0.274426  n/a   
 
 
-
 
NC_008699  Noca_1832  acyl-CoA dehydrogenase domain-containing protein  49.5 
 
 
411 aa  374  1e-102  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1860  acyl-CoA dehydrogenase domain protein  50.77 
 
 
407 aa  373  1e-102  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.51043  n/a   
 
 
-
 
NC_010552  BamMC406_3221  acyl-CoA dehydrogenase domain-containing protein  49.38 
 
 
414 aa  374  1e-102  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_4335  acyl-CoA dehydrogenase domain-containing protein  49.88 
 
 
414 aa  375  1e-102  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0735838  normal  0.987341 
 
 
-
 
NC_013595  Sros_1435  acyl-CoA dehydrogenase family protein  53.98 
 
 
400 aa  371  1e-101  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00297714  normal  0.111309 
 
 
-
 
NC_013739  Cwoe_4008  acyl-CoA dehydrogenase domain protein  47.26 
 
 
402 aa  371  1e-101  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2485  acyl-CoA dehydrogenase  49.75 
 
 
398 aa  371  1e-101  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_10155  acyl-CoA dehydrogenase fadE2  54.11 
 
 
403 aa  371  1e-101  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_2699  acyl-CoA dehydrogenase domain-containing protein  50 
 
 
404 aa  370  1e-101  Thermobispora bispora DSM 43833  Bacteria  normal  0.401579  normal  0.61 
 
 
-
 
NC_008345  Sfri_2214  acyl-CoA dehydrogenase domain-containing protein  47.63 
 
 
406 aa  369  1e-101  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
BN001307  ANIA_02264  Sad1/UNC domain protein (AFU_orthologue; AFUA_5G06480)  48.21 
 
 
1428 aa  366  1e-100  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.173696  normal 
 
 
-
 
NC_008726  Mvan_0116  acyl-CoA dehydrogenase domain-containing protein  47.77 
 
 
447 aa  367  1e-100  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_3866  acyl-CoA dehydrogenase domain-containing protein  48.39 
 
 
407 aa  367  1e-100  Nocardioides sp. JS614  Bacteria  normal  0.196465  n/a   
 
 
-
 
NC_008228  Patl_0635  acyl-CoA dehydrogenase-like  48.26 
 
 
406 aa  368  1e-100  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_5271  acyl-CoA dehydrogenase domain-containing protein  48.64 
 
 
414 aa  365  1e-99  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.166824  normal 
 
 
-
 
NC_009338  Mflv_0734  acyl-CoA dehydrogenase domain-containing protein  47.52 
 
 
418 aa  363  3e-99  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.998726  normal 
 
 
-
 
NC_009355  OSTLU_40224  predicted protein  47.48 
 
 
461 aa  362  9e-99  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1425  acyl-CoA dehydrogenase domain-containing protein  46.4 
 
 
410 aa  362  1e-98  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0947  acyl-CoA dehydrogenase domain-containing protein  46.4 
 
 
410 aa  362  1e-98  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_1151  acyl-CoA dehydrogenase domain protein  47.5 
 
 
402 aa  361  1e-98  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.73028  normal 
 
 
-
 
NC_008835  BMA10229_1622  acyl-CoA dehydrogenase domain-containing protein  46.4 
 
 
410 aa  362  1e-98  Burkholderia mallei NCTC 10229  Bacteria  normal  0.778123  n/a   
 
 
-
 
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