12 homologs were found in PanDaTox collection
for query gene Noca_1823 on replicon NC_008699
Organism: Nocardioides sp. JS614



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008699  Noca_1823  hypothetical protein  100 
 
 
207 aa  421  1e-117  Nocardioides sp. JS614  Bacteria  normal  0.202814  n/a   
 
 
-
 
NC_008699  Noca_1615  phage integrase family protein  36.54 
 
 
368 aa  70.9  0.00000000001  Nocardioides sp. JS614  Bacteria  normal  0.0481425  n/a   
 
 
-
 
NC_013093  Amir_3873  integrase family protein  34.45 
 
 
439 aa  65.1  0.0000000006  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.00124247  n/a   
 
 
-
 
NC_008009  Acid345_1133  phage integrase  36.36 
 
 
454 aa  55.1  0.0000008  Candidatus Koribacter versatilis Ellin345  Bacteria  hitchhiker  0.00289406  hitchhiker  0.000832848 
 
 
-
 
NC_008699  Noca_1724  phage integrase family protein  33.7 
 
 
378 aa  55.1  0.0000008  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2073  integrase family protein  33.64 
 
 
451 aa  51.2  0.00001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.087873  n/a   
 
 
-
 
NC_013947  Snas_5370  integrase family protein  28.93 
 
 
498 aa  48.5  0.00007  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.987782 
 
 
-
 
NC_008740  Maqu_3204  integron integrase  30.51 
 
 
322 aa  44.3  0.001  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1796  Phage integrase  33.33 
 
 
390 aa  43.9  0.002  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_23910  site-specific recombinase XerD  34.26 
 
 
402 aa  43.5  0.002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.075478  normal  0.15395 
 
 
-
 
NC_013385  Adeg_0419  integrase family protein  36.11 
 
 
414 aa  42.4  0.005  Ammonifex degensii KC4  Bacteria  hitchhiker  0.00000230336  n/a   
 
 
-
 
NC_007777  Francci3_1203  phage integrase  28.15 
 
 
394 aa  42  0.007  Frankia sp. CcI3  Bacteria  hitchhiker  0.00426039  normal  0.328241 
 
 
-
 
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