Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_23910 |
Symbol | |
ID | 8387715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 2578049 |
End bp | 2579257 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644976434 |
Product | site-specific recombinase XerD |
Protein accession | YP_003134216 |
Protein GI | 257056384 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.075478 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.15395 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCGAG TCTGGATCTA CGACCGGACC AAGAAGGCTA AGTACCGTGA AGCGGTCAAG AAGGCCAAAA GCCTTGGTCG TAGGCCGCCG GCACGTTGGG AGGTCATGTA CTACGACCAG ACCGGCAAGC TGCGCTCCGA GGTTGCTGCC ACCAAGGCTC GGGCAGAGCA ACGGCGTACC GAGCTGGAAG CTGCACTTTC GACAGACACC TATGTTGACC CTACAACGGC GAAGGTGTCG TTCGCTGAAG TGGCTGACAA GTGGCTTGAG TCTCGGCATG ATCTTCGGCC GTCGACTTGG TGGAAGTACC GCGGTCTGCT GGACACTCAT GTCAACGTGC GATGGGGTGA TGTGCAGCTT CGTGCGATCA GGAGCGAGGA CATCGCTGCT TGGCTGGGAT CGTTGTTGAA GTCGCGGACT GAGGGTGGCA GCGGTCTTGG TCCTTCGCAG GCCCGACATG CGTTCCGGGT GTTGTCGATG GTGCTCGATT GGTGCGTTCC TGCGAAGCTA CTGCGGAACC CTGCTGAGGG GGTCAAGCTG CCGGTTCGCC CGGAAACGGA ACATGTCTAT TTGAGCTTCG AGCAGGTCGA GCGTCTGGCT AATGCAGCGG GAGACCTCCG CACGAAGTAC GGCCGTCCGA CTGCCTCGGC CTCCGTCAAC AGGGCGCTGA TCCTGCTGTT GGCTTACACC GGTCTCCGAT GGGGTGAAGC TGCAGCGCTC CGAGTGGGGC GTGTCGATTT GGTCAAGCGG CGAATACGGG TCGTGAGCAC GTTTTACGAG CTCAATGGGG TGCAGCATGA GGGTCCGCCG AAGAGCGGCA AGCATCGGAC GGTGGCGATT CCACCGTCGT TGGTGCCGGA GTTGAAACAG GTCATTGGGG GCCGTGGGGA TCACGAGCTG GTGTTCACTA CAGCGCGCGG GGCGTCGTTA CGGGCGAACA ACTGGCGGGT GCGGGAGTTC AACCCCGCTG TGAAGTTGGC CAAGCTCGAT GGGCTCGGTC TCACTCCGCA CAAGCTGCGA CATACGGCCG CATCACTCGC CATCGCAGCG GGGGCAGATG TGAAAGTTCT TCAACACATG CTCGGTCATG CCGACGCGGC GATGACGCTC AACATCTACG GGCACCTGTT CCCCGACCGG CTCGACGAGG TCGCTGACAC GCTCGATGTT CGACGGCGCG AGGTACTGGG CAAGCCCTCG GCAAGCTGA
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Protein sequence | MARVWIYDRT KKAKYREAVK KAKSLGRRPP ARWEVMYYDQ TGKLRSEVAA TKARAEQRRT ELEAALSTDT YVDPTTAKVS FAEVADKWLE SRHDLRPSTW WKYRGLLDTH VNVRWGDVQL RAIRSEDIAA WLGSLLKSRT EGGSGLGPSQ ARHAFRVLSM VLDWCVPAKL LRNPAEGVKL PVRPETEHVY LSFEQVERLA NAAGDLRTKY GRPTASASVN RALILLLAYT GLRWGEAAAL RVGRVDLVKR RIRVVSTFYE LNGVQHEGPP KSGKHRTVAI PPSLVPELKQ VIGGRGDHEL VFTTARGASL RANNWRVREF NPAVKLAKLD GLGLTPHKLR HTAASLAIAA GADVKVLQHM LGHADAAMTL NIYGHLFPDR LDEVADTLDV RRREVLGKPS AS
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