Gene Acid345_1133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1133 
Symbol 
ID4069904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1411109 
End bp1412473 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content52% 
IMG OID637983143 
Productphage integrase 
Protein accessionYP_590210 
Protein GI94968162 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00289406 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000832848 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAACAATT CAATTGTGGA GGTAGTTCCA AGATCGAATG GCGCGTTGCT TGACACGTAT 
CAGGCAGCCT CATTCCTCAA CGTTTCAGAA AGCTGGGTGC GAAGGCATCA GGCTGAATTG
CCATCGGTAA CAGTCGGCAG ACTCGTTCGA TTCGATCCTG CGTTGCTGCA ACGAAACTTT
TCAGGCAGAA TGGCGCACGG GAAACCGCTG AACTCATCGG GAGAAAGAAG AGCACCGATG
CAAATTCAGC GTTATCAGAA CGGACATGTT TACAAAAGGG GCACCAAATT GAAGGTGTGG
TACGGTCGTT TCCGAGAGGA CTTGCTCACG CCGGGCGGGG GCATTGTTCG ACGTACTCGC
AACATCCGAC TTGGCACGAT TGCGGAGTTG CCTTCGAGGG CCTCCGCTGT GATCCGATTG
CAGGAAAATA TCGCCTCTCA CAAACCCAAG ACTGCCATGA CGGTTTCGGA GCTACACAGG
CGATGGGAGA ACGCAGAACT TCCGACGATC AAGCGAAACA CTGCTGGGTA CTATCAGAAG
ATTTTGCGAT GCCACATTCT TCCCACGTTC GGTCAACGCG AAATTGGAAG CATCACTCGC
GAAGACGTGC AGACGTTTCT CGCAAGTCAG GCGGGGAAAT ATTCTCGCAA CACACTTCGA
GGGATGCGGG TTTCGCTTGG CAGAATTCTG ACGTGGGCGG TGAACTGCGC TTGGCTGGAA
AAGAATCCCT GTTCAAAGGT ACCGCTACCG CATGTTGAAA AGGGCGAAAT ACAACGCTCT
ATTCTCATGA CGGAGCAAGT TACCGCGATT GCCGACAAGT TGGAAGAGCC TTACAGAACG
CTCGTTCTCC TTCTTGCGGT GACAGGCCTT CGGATTGGGG AGGCAATTGG AATCAAGTGG
TCTGACTTCG ACGGCGACAT TCTGCATGTG TCGCGCACCA TTTATGACGG CAAAGCAGAC
TCTACAAAGA CAGCAAGTTC GAATCGAAAA CTGCCCATCC CGGCTGCTCT CATTTCTCGG
ATGAGAATGT TGGGAGATGG GGAGTTTATC TTTCACTCGC GGGCAGGGTC ACCAGTTAAT
CCCGGCAACG CTCTGAAGCG TTACTTGCGA CCAGCCGCGA AGGCCTTAGG AATTCGACTC
ACGGGCTGGC ATGACTTCAG GCACACGCAA GCAACGCAAT TGCTGCGAAG TGGATCGTCG
CCGAAAGTGG TTTCGGGAAT TTTGGGTCAC TCCGACGTCG GAATCACTTT GAACGTCTAC
GAGCACACAG AGACAGAAAT CTTTCGTGCG CCACTGGAAC GAATAGCCGA CCAGTTGTTA
CCAACTGTTA CCAAGTCGCT CCAAGCTGTC GAATCAAATG CTTGA
 
Protein sequence
MNNSIVEVVP RSNGALLDTY QAASFLNVSE SWVRRHQAEL PSVTVGRLVR FDPALLQRNF 
SGRMAHGKPL NSSGERRAPM QIQRYQNGHV YKRGTKLKVW YGRFREDLLT PGGGIVRRTR
NIRLGTIAEL PSRASAVIRL QENIASHKPK TAMTVSELHR RWENAELPTI KRNTAGYYQK
ILRCHILPTF GQREIGSITR EDVQTFLASQ AGKYSRNTLR GMRVSLGRIL TWAVNCAWLE
KNPCSKVPLP HVEKGEIQRS ILMTEQVTAI ADKLEEPYRT LVLLLAVTGL RIGEAIGIKW
SDFDGDILHV SRTIYDGKAD STKTASSNRK LPIPAALISR MRMLGDGEFI FHSRAGSPVN
PGNALKRYLR PAAKALGIRL TGWHDFRHTQ ATQLLRSGSS PKVVSGILGH SDVGITLNVY
EHTETEIFRA PLERIADQLL PTVTKSLQAV ESNA