Gene Noca_1823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1823 
Symbol 
ID4597661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp1942853 
End bp1943476 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content66% 
IMG OID639776423 
Producthypothetical protein 
Protein accessionYP_923022 
Protein GI119716057 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.202814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGGGCA GGACCCCCTC GTCCGGTCAG CAATCTCTTG ACCGTGACAG GAGCGTGCTC 
CCGTGTTCGA AACAGCAGAT CAACGTCCAG GCGGCGGTTC CTGATGGCCT GGGCGGATGC 
CCATGGCACC GGCTTCCGCG GTGTCTACCG CGGACCGAAC GGCGCCAAGC TCAAGACCAA 
GACGTTCAAG AGCAGATCCA TGCCCGGTTC AAGGTTCTCC AGGCCTGCCT CGCCGCCCGC 
AAGGGCGTGT CAGCCCGTCG TGATCGGCTC ATCCAGTACA ACCCGTGCGA GAGCACTCAG 
CTGCCGGTGA TCCCCGAGCG CGAGGTCACC ATCCTGGAGC CGGACCAGGT CGACAAGATC 
CTCCTGGCCC TCGACCCCTG GTGGCGGCTC CTGCCGCTGT TGCTCTCGGA GACCGGACTC 
CGCTGGGGTG AGGCCATGGG CCTGACTGTG GACTCGTTCA CGCTGGACTT CCGGTGCCTG 
TTCGTGCGCA GAACGACCAT CGAGACCAAG GTCGAGCAGA CCGGCAACGG CACTCGCTTC 
AGGTGGAAGC CCTATCCGGG CGAGGCAGCC CTGTGGCTTG TGCGTGACCA TGCTGCTGCC 
GCAAGGCTGA GTCCGGCTGG GTAG
 
Protein sequence
MGGRTPSSGQ QSLDRDRSVL PCSKQQINVQ AAVPDGLGGC PWHRLPRCLP RTERRQAQDQ 
DVQEQIHARF KVLQACLAAR KGVSARRDRL IQYNPCESTQ LPVIPEREVT ILEPDQVDKI 
LLALDPWWRL LPLLLSETGL RWGEAMGLTV DSFTLDFRCL FVRRTTIETK VEQTGNGTRF 
RWKPYPGEAA LWLVRDHAAA ARLSPAG