Gene Snas_5370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5370 
Symbol 
ID8886579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5705256 
End bp5706752 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content55% 
IMG OID 
Productintegrase family protein 
Protein accessionYP_003514095 
Protein GI291302817 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.987782 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTATT CACGTTGTCG GAAGACTTCC AAGGGTTTGA AACGCTACAC CGCCTACTAT 
CTCGATTCCC GCGGCGACGA GCGGTCAGCG GGCACCTTCG GCAAGAAGAA GGAAGCCGAC
AAAGCGTGGC AACGTGCCGA AGGCAAGGTG TCCGAAGGTC GGGGCGGGCA GCTCATTCGA
GGTCGGCAGA CCTTCAAGAC GTATGTCGAA GAAAAGTGGC TGCCGAACCT GTCCGTCGAG
CAAAGCACGC TTGAGGGCTA TACGTACGTC TTGTACGCGC ACATCATGGA CTATTTCGAA
ACGTCCCGGA TGATGGACAT ATACGCGAAC AACATTCGTG AGTGGATTAA GACCCTCAAG
AGCAACGGGA TGACTGCTGC GAACATCCAA CACGTCAAGA CTCAGTTGAG TTCCATTCTC
ACCAGTGCGG TCAAAGACGA AGTCATCGTC GGCAACCCCT GCCTGCTGGT TGACATCGAT
CCGGTCCCGC TGAAACCCCT GCGCATTGTC ACTCCCGAAG AATTCGACAT CTTTCACGCC
GCGTTGCCCG ACGAGATGTC AAAACTTCTC GTCGAAACCG GAATCGAAAC CGGGTGCCGG
TGGGGAGAAC TATCTGAACT TCGTCCGAAA GACTTCGACT TCGATACCTG CGTAGTAACA
ATCAGCCGCG CAGTCGTTCA GCTGGTACGC AAATTCCATC CAGAAGGCAA ACGGTTCCTC
GTCAAGGAAT ACCCAAAAGA CAAAGAATTC CGATACTTCA AAGTCAACAG GGCCCTCTGT
CGCAGGATTC AGGTTCATAT CGAGAAGAAC GGGCTCGCCG ACGATGACTT GTTGTTTTGG
TACGTGCCGA AGCAAGAGGC CGAGCTTCCA GCGCTGGACG CCGATCCCAA GACCCTCGGG
AAGACCAAAC CCAATGAAAA AGGCAGGACC TACCAGCACG GCACCACATC CGCGTACACT
GCGGCCAAAT GCCGTTGCGA CCACTGCAAG AAGGCAATGG CCATCTATCG AGCAAAACGA
CGTGCGGAGG GCAAAGACCA GCCCCGTAAA GTCCGCAACT GGGACACCGA TGGTCACATC
CCCAAGCGGT GGTTCCGTGA TCGAATCCTG AGGCCAGCCC TGAAGAAGTC TGGCATCGCC
GTCGACATCG CCATGCACAA GCTGCGGCAT GCCCACGCCA GTTGGGCGCT GAAGGGAGGA
GCCGATCTCC ACATTGTCAA AGAGCGGCTA GGTCACGCCA ACATCAGCAC TACTGAGCGA
TACCTACACG CGATGGATGA AGGCGACGAA ACGGCTCTTG AAGCGATCGA GTCGTTCCGG
CAGAGTCAAA GAAGTAAAGG CAGGACTCAA GCGCTCGTGC AGATCGGCAC TGTGGATGAG
CAGTCTCACC AGGGTGCGAT GACCACTGAG CAGGTGCTTG AGGAGATGAA ACGAATCGAT
CAGCTCCAAG CTCATCTTCG TGATCAACTG TCGCAGTCAC TGAGTAGCGG CGCATAA
 
Protein sequence
MGYSRCRKTS KGLKRYTAYY LDSRGDERSA GTFGKKKEAD KAWQRAEGKV SEGRGGQLIR 
GRQTFKTYVE EKWLPNLSVE QSTLEGYTYV LYAHIMDYFE TSRMMDIYAN NIREWIKTLK
SNGMTAANIQ HVKTQLSSIL TSAVKDEVIV GNPCLLVDID PVPLKPLRIV TPEEFDIFHA
ALPDEMSKLL VETGIETGCR WGELSELRPK DFDFDTCVVT ISRAVVQLVR KFHPEGKRFL
VKEYPKDKEF RYFKVNRALC RRIQVHIEKN GLADDDLLFW YVPKQEAELP ALDADPKTLG
KTKPNEKGRT YQHGTTSAYT AAKCRCDHCK KAMAIYRAKR RAEGKDQPRK VRNWDTDGHI
PKRWFRDRIL RPALKKSGIA VDIAMHKLRH AHASWALKGG ADLHIVKERL GHANISTTER
YLHAMDEGDE TALEAIESFR QSQRSKGRTQ ALVQIGTVDE QSHQGAMTTE QVLEEMKRID
QLQAHLRDQL SQSLSSGA