Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5370 |
Symbol | |
ID | 8886579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 5705256 |
End bp | 5706752 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | integrase family protein |
Protein accession | YP_003514095 |
Protein GI | 291302817 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.987782 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCTATT CACGTTGTCG GAAGACTTCC AAGGGTTTGA AACGCTACAC CGCCTACTAT CTCGATTCCC GCGGCGACGA GCGGTCAGCG GGCACCTTCG GCAAGAAGAA GGAAGCCGAC AAAGCGTGGC AACGTGCCGA AGGCAAGGTG TCCGAAGGTC GGGGCGGGCA GCTCATTCGA GGTCGGCAGA CCTTCAAGAC GTATGTCGAA GAAAAGTGGC TGCCGAACCT GTCCGTCGAG CAAAGCACGC TTGAGGGCTA TACGTACGTC TTGTACGCGC ACATCATGGA CTATTTCGAA ACGTCCCGGA TGATGGACAT ATACGCGAAC AACATTCGTG AGTGGATTAA GACCCTCAAG AGCAACGGGA TGACTGCTGC GAACATCCAA CACGTCAAGA CTCAGTTGAG TTCCATTCTC ACCAGTGCGG TCAAAGACGA AGTCATCGTC GGCAACCCCT GCCTGCTGGT TGACATCGAT CCGGTCCCGC TGAAACCCCT GCGCATTGTC ACTCCCGAAG AATTCGACAT CTTTCACGCC GCGTTGCCCG ACGAGATGTC AAAACTTCTC GTCGAAACCG GAATCGAAAC CGGGTGCCGG TGGGGAGAAC TATCTGAACT TCGTCCGAAA GACTTCGACT TCGATACCTG CGTAGTAACA ATCAGCCGCG CAGTCGTTCA GCTGGTACGC AAATTCCATC CAGAAGGCAA ACGGTTCCTC GTCAAGGAAT ACCCAAAAGA CAAAGAATTC CGATACTTCA AAGTCAACAG GGCCCTCTGT CGCAGGATTC AGGTTCATAT CGAGAAGAAC GGGCTCGCCG ACGATGACTT GTTGTTTTGG TACGTGCCGA AGCAAGAGGC CGAGCTTCCA GCGCTGGACG CCGATCCCAA GACCCTCGGG AAGACCAAAC CCAATGAAAA AGGCAGGACC TACCAGCACG GCACCACATC CGCGTACACT GCGGCCAAAT GCCGTTGCGA CCACTGCAAG AAGGCAATGG CCATCTATCG AGCAAAACGA CGTGCGGAGG GCAAAGACCA GCCCCGTAAA GTCCGCAACT GGGACACCGA TGGTCACATC CCCAAGCGGT GGTTCCGTGA TCGAATCCTG AGGCCAGCCC TGAAGAAGTC TGGCATCGCC GTCGACATCG CCATGCACAA GCTGCGGCAT GCCCACGCCA GTTGGGCGCT GAAGGGAGGA GCCGATCTCC ACATTGTCAA AGAGCGGCTA GGTCACGCCA ACATCAGCAC TACTGAGCGA TACCTACACG CGATGGATGA AGGCGACGAA ACGGCTCTTG AAGCGATCGA GTCGTTCCGG CAGAGTCAAA GAAGTAAAGG CAGGACTCAA GCGCTCGTGC AGATCGGCAC TGTGGATGAG CAGTCTCACC AGGGTGCGAT GACCACTGAG CAGGTGCTTG AGGAGATGAA ACGAATCGAT CAGCTCCAAG CTCATCTTCG TGATCAACTG TCGCAGTCAC TGAGTAGCGG CGCATAA
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Protein sequence | MGYSRCRKTS KGLKRYTAYY LDSRGDERSA GTFGKKKEAD KAWQRAEGKV SEGRGGQLIR GRQTFKTYVE EKWLPNLSVE QSTLEGYTYV LYAHIMDYFE TSRMMDIYAN NIREWIKTLK SNGMTAANIQ HVKTQLSSIL TSAVKDEVIV GNPCLLVDID PVPLKPLRIV TPEEFDIFHA ALPDEMSKLL VETGIETGCR WGELSELRPK DFDFDTCVVT ISRAVVQLVR KFHPEGKRFL VKEYPKDKEF RYFKVNRALC RRIQVHIEKN GLADDDLLFW YVPKQEAELP ALDADPKTLG KTKPNEKGRT YQHGTTSAYT AAKCRCDHCK KAMAIYRAKR RAEGKDQPRK VRNWDTDGHI PKRWFRDRIL RPALKKSGIA VDIAMHKLRH AHASWALKGG ADLHIVKERL GHANISTTER YLHAMDEGDE TALEAIESFR QSQRSKGRTQ ALVQIGTVDE QSHQGAMTTE QVLEEMKRID QLQAHLRDQL SQSLSSGA
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