| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3873 |
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| Symbol | |
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| ID | 8328066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4538643 |
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| End bp | 4539962 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644944361 |
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| Product | integrase family protein |
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| Protein accession | YP_003101598 |
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| Protein GI | 256377938 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00124247 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGGGGT ATTCGCGTCG GCGTGTGGGT GCGTCGGGTC GGGTTCGGTA CACGGCTTAT
TACTGGGATG TGTGGGGGTG TGAGCGGTCG GCGGGGACGT TCGATCGTGT GCGGGATGCT
GATCGTGCGT GGCGGCGTGC CGAGGTGGAT GTGGGTTCGG GGCGGTTCGC GGATGCGCGG
AGTGCTCGGC AGTCGTTCGG GTGGTACGTG AGAGTGGTGT GGTTGCCCGC GCACCTGGTG
GAGGCGACCA CGCGGCAGAC CTACACCCAT GTGGTCGAGC GTTATCTGCT GCCGGAGTTC
GGCGGGATGC GGATGGATCG TGTGTTGCCG TGTCACGTGC GGGAGTTCGT GTGGCGTTTG
TGTGCTCGGG GTGTGTCGGC GCACGTGGTG CACCGGTGTC GGGCGGTGCT CAGCGCGATC
TTCACCACGG CGTTGCGGGA TCAGGTCATC GCGCAGCACC CGTGCGCGGG TGTTCGGGGG
CCGGTGGCGC CGTCGAAACC GATGCGGGTT CTGGAGCCTG GGGAGTTGGA CCGGCTGCTC
GCGGTCCTGC CGGGGGAGTG CTGGCGGTTG CTGGTGGAGT TGGCTGTCGA GTCGGGGGTG
CGGTGGGGTG AGCTGGTCGA GTTGCGCGCG GGGGATCTGG ACGCGGGCTC CTGCCTGCTG
ACGGTGGCCA GGGCGGTGGA GGAGGTCGAG CCGCGCTTTC ACCCGACTGG TGGGCGGTTT
CTGGTCAAGC CGTACCCGAA GGAACGCGAG CACCGCCGCT TGTTGTTACG CCGGGTCGTC
GTGGAGAACG TGCTGACCTA TGTGGAGCAG GCAGACCTGA AGACGGATGA CCTGCTGTTC
CCGTTCCCCG ACAGTCCACC GGTTGTGGTG CCACGAGCGG TCGAGGCCGG TGCGATTCCT
GATGGACACG GCACATTGAC CCGCTACTCA CGGCAGAAAT GTCGGTGCGG GCACTGCCGT
GCCGCTTACG CGCGTTACCG GGCCGGACGA CGTGACCGGG GCAAGGACGC TCCGCGTAGT
CGACGGCGGG TGGACACGGA CGGGCACCTG CCGCGCAGGT GGTACCTGAG GAACGTCTGG
AAACCCGCCC TGGCCGCGGC TGGGATCACC CGGCGTGTGC GGATGCACGA CCTGCGCCAT
GCGCACGCCT CCTGGCTTGT CGCCGGTGGC GCTGACATCC AGACCGTCCG CGCACGCCTC
GGCCACTCCA GCCTTCGCGC TACTGAGAAG TACCTGCACA CCCTGGCTGA GTCGGACCAA
GCGGCGCTGG ATGCCTTCGA GCGTGTGCGG CACGGCCGCG CTGGTGCCGG CGAGGACTGA
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| Protein sequence | MVGYSRRRVG ASGRVRYTAY YWDVWGCERS AGTFDRVRDA DRAWRRAEVD VGSGRFADAR
SARQSFGWYV RVVWLPAHLV EATTRQTYTH VVERYLLPEF GGMRMDRVLP CHVREFVWRL
CARGVSAHVV HRCRAVLSAI FTTALRDQVI AQHPCAGVRG PVAPSKPMRV LEPGELDRLL
AVLPGECWRL LVELAVESGV RWGELVELRA GDLDAGSCLL TVARAVEEVE PRFHPTGGRF
LVKPYPKERE HRRLLLRRVV VENVLTYVEQ ADLKTDDLLF PFPDSPPVVV PRAVEAGAIP
DGHGTLTRYS RQKCRCGHCR AAYARYRAGR RDRGKDAPRS RRRVDTDGHL PRRWYLRNVW
KPALAAAGIT RRVRMHDLRH AHASWLVAGG ADIQTVRARL GHSSLRATEK YLHTLAESDQ
AALDAFERVR HGRAGAGED
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