20 homologs were found in PanDaTox collection
for query gene Noca_1588 on replicon NC_008699
Organism: Nocardioides sp. JS614



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013171  Apre_0514  hypothetical protein  43.81 
 
 		 1108 aa  837    Anaerococcus prevotii DSM 20548  Bacteria  normal  1  n/a   
 
 
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NC_008699  Noca_1588  type III restriction enzyme, res subunit  100 
 
 		 1094 aa  2264    Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
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NC_010655  Amuc_1677  type III restriction protein res subunit  44.12 
 
 		 1110 aa  834    Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  1  normal  1 
 
 
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NC_002950  PG1697  type II restriction endonuclease, putative  33.01 
 
 		 1324 aa  305  3.0000000000000004e-81  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.431885 
 
 
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NC_008532  STER_1330  superfamily II DNA/RNA helicase  33.69 
 
 		 1462 aa  287  7e-76  Streptococcus thermophilus LMD-9  Bacteria  normal  1  n/a   
 
 
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NC_008025  Dgeo_0923  type III restriction system endonuclease, putative  33.14 
 
 		 850 aa  276  2.0000000000000002e-72  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.297782  normal  0.710941 
 
 
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NC_009943  Dole_0905  putative restriction enzyme  31.82 
 
 		 853 aa  275  3e-72  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.710638  n/a   
 
 
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NC_009484  Acry_2421  hypothetical protein  32.86 
 
 		 844 aa  273  2e-71  Acidiphilium cryptum JF-5  Bacteria  normal  0.128408  n/a   
 
 
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NC_009767  Rcas_2226  putative uncharacterized restriction enzyme  30.78 
 
 		 837 aa  265  3e-69  Roseiflexus castenholzii DSM 13941  Bacteria  unclonable  0.000214566  decreased coverage  0.00000161131 
 
 
-
 
NC_010831  Cphamn1_0745  hypothetical protein  32.44 
 
 		 852 aa  259  3e-67  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.947615  normal  0.0888833 
 
 
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NC_008782  Ajs_0198  type III restriction system endonuclease, putative  33.95 
 
 		 848 aa  250  1e-64  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013721  HMPREF0424_0750  Eco57I restriction endonuclease  24.95 
 
 		 1364 aa  114  1.0000000000000001e-23  Gardnerella vaginalis 409-05  Bacteria  n/a    decreased coverage  0.000000117598 
 
 
-
 
NC_013515  Smon_1454  Eco57I restriction endonuclease  22.57 
 
 		 1359 aa  110  1e-22  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_009767  Rcas_2228  site-specific DNA-methyltransferase (adenine-specific)  35.71 
 
 		 526 aa  63.2  0.00000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0314397  hitchhiker  0.0000846728 
 
 
-
 
NC_010831  Cphamn1_0747  Site-specific DNA-methyltransferase (adenine-specific)  30.99 
 
 		 530 aa  60.8  0.0000001  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  0.141575 
 
 
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NC_008025  Dgeo_0926  Eco57I restriction endonuclease  37.23 
 
 		 321 aa  60.8  0.0000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.419584  normal  0.538577 
 
 
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NC_009943  Dole_0904  site-specific DNA-methyltransferase (adenine-specific)  28.71 
 
 		 514 aa  58.5  0.0000007  Desulfococcus oleovorans Hxd3  Bacteria  decreased coverage  0.0000734912  n/a   
 
 
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NC_008782  Ajs_0197  Eco57I restriction endonuclease  33.67 
 
 		 562 aa  57.4  0.000002  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
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NC_009484  Acry_2422  site-specific DNA-methyltransferase (adenine-specific)  32.98 
 
 		 531 aa  50.8  0.0001  Acidiphilium cryptum JF-5  Bacteria  normal  0.0501515  n/a   
 
 
-
 
NC_004347  SO_4267  type I restriction enzyme EcoKI subunit R  21.8 
 
 		 1188 aa  45.1  0.007  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
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