| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1588 |
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| Symbol | |
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| ID | 4596496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1686416 |
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| End bp | 1689700 |
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| Gene Length | 3285 bp |
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| Protein Length | 1094 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639776187 |
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| Product | type III restriction enzyme, res subunit |
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| Protein accession | YP_922789 |
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| Protein GI | 119715824 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCTAGCC CGAAGATCAG CACCTACCGC GAGATCGTCC CTCTCATCTA CTCGTGGCGG
ACTCCTGACG TCCCCAAGTA CGCGGGCTGG GAGAAGATCG GCTACACCGA GCAGGACAGC
GCGGAAAAGC GCATCGACCA GCAGGCCAGC CAGATGTCCA TCACCAAGGA GAAGGTCTGG
TCTCGACGCG CGCTGTACAC CACGGAGGCC GGCGGGCGGT TCACGGACAA GGACTTCCAC
GAGTACCTGC GCCAGCAGGG GGTCCAGCGA GAAACCACCC CCAAGCGGAC CGAGTGGCAC
AACCTCGCGG CAGCGCCGAA GAGGTCGCTG GACTACTTCA ACGAGTTCGC AGGGCAGGAC
TTCGCTGACT TCCAGGCCGA TGGAGTGGAC GACTACGTCC TGCGCCCTGA GCAGCAGGCC
GCCGTCGATC AGGCGCTGGC CGCCTTCGCC GCGCACGACG AGGTTCTGTG GAACGCGAAG
CCCCGGTTCG GCAAGACGCT GACCACCTAC AACCTGATGC GGAAGCTCGA CGTCCACCGG
GTCCTCATCG TCACCAACCG TCCTGCGATC GCGAACTCCT GGTACGACGA CTTCATGCGC
TTCATCGGCC ACCGGACGAC CTTCAAATTC GTCTCGGAGT CGCCGTCTCT GGAGAACCGC
TCTCCGATGA GTCGGGAGCA GTGGCGCGCC CACTCACGCG AGCACGGCGA TGCGGACCCG
CGCATCGTCG AGTTCGTCTC GCTGCAGGAC CTCAAGGGGT CGCAGTACTT CGGCGGCAAC
TACCCCAAGC TCAAGCACGT CGCCGACTTC GAGTGGGACC TGCTGGTCAT TGACGAGGCC
CATGAGGGCA TCGACACCGA CAAGACCGAC GTCGCCTTCG ACCAGATCAC GCGCGCCCGC
ACGCTGCACC TGTCGGGCAC ACCGTTCAAG GCGCTGGCCA AGGGCAAGTT CGGCAAGGAC
CAGATCTTCA ACTGGACATA CGAGGACGAG CAGACCGCCC GCCAAGAGTG GGCCGACGCC
TCCCAAGAGA ACCCGTACCA GGCACTGCCG AAGCTCAACC TGCTGACCTA CCAGATCTCG
CGGATGATCA CCGACCGCCT GGCCGAGGGC GTCGCGCTCG AGGAGGACGA GGCGAACATC
GACTTCACCT TCGATCTCAA CGAGTTCTTC GCGACCAAGG ACAACGGCTA CTTCGAGCAC
GAAGCCGAAG TGATCCGGTT CCTCGACTGC CTAGCGTCCA ACGAGAAGTA CCCGTTCTCC
ACCCCAGAGC TGCGCGATGA GATCCGACAC TCGTTCTGGC TGCTCAACCG GGTCGCCTCC
GCCAAGGCGC TGCAGAGGCT GCTCAAGCAG CACGAGGTGT TCAAGGACTA CACGGTGGTT
CTGGCTGCCG GCGACGGACG CTCCAACGAC GACTCCGACC TGGTCGCGGT CGGCAAGTCG
CTGGACAAGG TGCGCACCGC CATCGCGGAG GCCGAGGAGT GCGATGGGAA GACGATCACG
CTGTCGGTCG GTCAGCTGAC CACAGGCGTC ACGGTGCCCG AGTGGACCGC AGTGATCATG
CTGTCCGACA TGTCCTCGCC GGCGCAGTAC ATGCAGGCGG CGTTTCGTGC GCAGAACCCG
TGCACGTTCG AGCGCGCCGA GCACGTGTTC CAGAAGCAGA ACGCCTACAT CTTCGACTTC
GCGCCTGAGC GGACGCTGAA GATCTTCGAC GCCTTTGCCA ACAACCTGCA CCCGAACCCG
TCTGGCGACC CGGGGGTGCG GCTGGAGAAC ATCCGTACGT TGCTGAACTT CTTCCCGGTC
CTGGGCGAGG ACTCCGAGGG CCGGATGATC GAGCTCGACG CGTCCCAGGT CCTGACGTTC
CCACAGGTGT TCAAGGCCCG CGAGGTGGTG CGTCGCGGAT TCCTGTCGAA CCTGCTGTTC
GCCAACGTGG CTGGCATCTT TCGCTACTCC GCGCACGTCA AGGAGATCCT CGACAAGCTG
CCCACCGCGA AGCAGGGCAA GACCAAGAAG GGGGAGCCGA TCGAGATCCC GCACCCGCCG
CCGGTCACCG ACCCCGACGG CAACGTCCTC CCGACCGGCC TCGCGTCCGT CATCAACCCC
AAGGTCGAGG AGCTCGGCAA GCCGGTCTGG CGGACCGAGG ACATCCCGAT GCCGGAGCCA
GACGTACCCG TGCACACCAT GGCCACGAAG ATCGCGAAGG CGGTCACCGA GCAGAGCCAC
GACAAGCGCG AGGAGCTTAA GGAAGCCTAC GGACTCACCG CGGCCCAGGT CGACCGCGAC
GAGAAGCGCA CCGAGCAGGC CGTGAAGGCG CAGGTCGAGC GTGCTTACAC CGAGCACAAC
ATTGCGAGCA AGCACCTTGA GGACGAACTG GAGAACGCTG CCACCGAGGC GGAGGCCGAG
GCGATCCAGG CCAAGAAGGT CGAGCAGGAC GAGGCGTTCA AAGCGAACAT CCTGTCCATC
GTCACCGAGA CGATGGACTC GATCGTGCCC GAAGTGGTCA CCCGCGAGGA GATCAAGTCC
GAGCAGAAGC GGGCGAACCG GACGATGGAC GACGCCCGCT CACACCTGCG CGGCTTCGCC
CGGACGATCC CGATGTTCCT GATGGCATAC GGCGACCGCG ACATCCGGCT GGCGAACTTC
GACGACTACA CGCCCGACGA CGTCTTCCAC GAGATCACCG GGATCACCGA GGCGGAGTTC
CGCGTCCTGC GCGACGGCCA AGAGATCACC GAGGAAGACG GCACCGTCAC GAAGATCCCC
GGGATGTTCG ACGAGGCCGT CTTCGACCAG GCCGTCCAGG AGTTCCTGAA CAAGAAGGAA
GCACTGGCCG ACTACTTCGA CGACGCGCAG ACCGAGAACA TCTTCGCCTA CATCCCGCAG
CAGAAGACGT CCCTGGTGTT CACGCCGCAG CACGTGGTCA AGACGATGGT CGACATCCTC
GAGGCCGAGG ACCCAGGTGT CTTCGCCGAC CCGGACAAGA CCTTCGCCGA CCTGTTCTCG
ACTGCCGGGC TGTACCTGAT GGAGCTGGTG CGGCGCCTCG ACACCGGCCT TGCCAATGCC
CACCCTGACC AGGACGAGCG GATCAAGCAC ATCCTGACCT CACAGATCTT CGAGATGAGC
CACAACGAGA TCCTCCACCG CATCACCATC GAGGCAGTGT CGGGGGGTGT TCCCGAACGC
AAGGAGTGGA TCGAGAGGTC CGGACACTTC CGCGTAGGAA ACCTCGCCAG GATGACGGCG
GATGAGCGCA AGAAGGCCGT GAACGACATG TTGGGAGAGA ACTGA
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| Protein sequence | MPSPKISTYR EIVPLIYSWR TPDVPKYAGW EKIGYTEQDS AEKRIDQQAS QMSITKEKVW
SRRALYTTEA GGRFTDKDFH EYLRQQGVQR ETTPKRTEWH NLAAAPKRSL DYFNEFAGQD
FADFQADGVD DYVLRPEQQA AVDQALAAFA AHDEVLWNAK PRFGKTLTTY NLMRKLDVHR
VLIVTNRPAI ANSWYDDFMR FIGHRTTFKF VSESPSLENR SPMSREQWRA HSREHGDADP
RIVEFVSLQD LKGSQYFGGN YPKLKHVADF EWDLLVIDEA HEGIDTDKTD VAFDQITRAR
TLHLSGTPFK ALAKGKFGKD QIFNWTYEDE QTARQEWADA SQENPYQALP KLNLLTYQIS
RMITDRLAEG VALEEDEANI DFTFDLNEFF ATKDNGYFEH EAEVIRFLDC LASNEKYPFS
TPELRDEIRH SFWLLNRVAS AKALQRLLKQ HEVFKDYTVV LAAGDGRSND DSDLVAVGKS
LDKVRTAIAE AEECDGKTIT LSVGQLTTGV TVPEWTAVIM LSDMSSPAQY MQAAFRAQNP
CTFERAEHVF QKQNAYIFDF APERTLKIFD AFANNLHPNP SGDPGVRLEN IRTLLNFFPV
LGEDSEGRMI ELDASQVLTF PQVFKAREVV RRGFLSNLLF ANVAGIFRYS AHVKEILDKL
PTAKQGKTKK GEPIEIPHPP PVTDPDGNVL PTGLASVINP KVEELGKPVW RTEDIPMPEP
DVPVHTMATK IAKAVTEQSH DKREELKEAY GLTAAQVDRD EKRTEQAVKA QVERAYTEHN
IASKHLEDEL ENAATEAEAE AIQAKKVEQD EAFKANILSI VTETMDSIVP EVVTREEIKS
EQKRANRTMD DARSHLRGFA RTIPMFLMAY GDRDIRLANF DDYTPDDVFH EITGITEAEF
RVLRDGQEIT EEDGTVTKIP GMFDEAVFDQ AVQEFLNKKE ALADYFDDAQ TENIFAYIPQ
QKTSLVFTPQ HVVKTMVDIL EAEDPGVFAD PDKTFADLFS TAGLYLMELV RRLDTGLANA
HPDQDERIKH ILTSQIFEMS HNEILHRITI EAVSGGVPER KEWIERSGHF RVGNLARMTA
DERKKAVNDM LGEN
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