| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2226 |
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| Symbol | |
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| ID | 5539707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2873088 |
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| End bp | 2875601 |
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| Gene Length | 2514 bp |
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| Protein Length | 837 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640894359 |
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| Product | putative uncharacterized restriction enzyme |
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| Protein accession | YP_001432327 |
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| Protein GI | 156742198 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000214566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00000161131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGTAACT TCTTCCCCCC GCGCCCCAAG GTCGAGCCGA AAATCTACGC CTACAAGGAC
ACCAACCCCG AATACGAGGG CTTGCTCAAG ATCGGCTACA CCACCAAGAG CGTGCAGGAG
CGGGTGGCGC AGCAGTATCC CACCCTGCGG CCCGGCGGCA AGCTGCCGTA TTGCATCGTG
CTGGAAGAGC CGGCTATCCG CAACGATGGC ACAGTCTTCA CCGATCGCGA CGTGCACCGC
ATGCTGCGCA TCAACGGCAT CCGCAACGAG GGCGGCGAAT GGTTCCGCTG CACCGTCGAA
CAGGTCAGGG CGGCGATTAA TGCCGTGCGA GCTGGGCAAC TCTTGGAAGA GCAGCGCTCC
CTCAACTTCA CGATGCGGCC AGAGCAGGAG GCAGCGGTGG CAAAGACCAT GGCCTACTTC
CAAAGCTACC GCCGGGAAAA CGGCAAGCCG CCGCATTTCC TCTGGAACTG CAAGATGCGC
TTCGGCAAGA CCTTCGCCGC CTATCAACTG GCCAAACGCA TGGGCTGGAA AAAGGTTCTC
GTGCTGACCT TCAAGCCAGC GGTGCAGAGC GCCTGGGAAG AGGATTTGCG CTGCCACGTG
GATTTTCAGG GCTGGCAGTT CATCAAGCCC GGCGGGCTGA CCTACGAGCA GGCAGATAAA
AACAAGCCTA TCGTCTGCTT TGGCTCGTTT CAGGACTATC TCGGCCGCAA TCCGAAGACG
GGCGGCATCA AAGCCAAGAA CGAATGGGTG CATGCCACCC ACTGGCACTG CGTCATCTTT
GATGAATACC ACTTCGGCGC TTGGCGCGAG AAGGCCAAAG ACCTGTTTGA GGGCGAGGAT
GAAGCGGAAC GGAAAGCCTC GGAAGGGGAA GCCATTGATT ACTTCGATGA GGATATCCTG
CCCATCACCT CCGATCACTA CCTGTACCTT TCCGGCACAC CGTTCCGGGC CATTGCCACC
GGCGAGTTCA TCGAAGAGCA AATTTACAAC TGGACATATT CTGATGAACA GAAGGCAAAA
GAGGAGTGGG ACGACAGCAA CGGCCCCAAC CCCTATGCCG CATTGCCGCG CATGGTGCTG
ATGACCTATC AACTGCCAGA CGCCATTCGC GAAGTGGCGA TGCAGGGAGA GTTCAACGAG
TTCGATCTGA ACGTGTTCTT TTCGGCCGAG GGCGTGGGCG ACAAGGCGCG GTTCAAATAC
GAAGACGAGG TGCAGAAGTG GTTGGACCTC ATCCGTGGGG CATACCTGCC TACAAACCTG
GATAACCTCC GTTTGGGAGC GCAGAAGCCG CCGCTCCCCT ACTCGGATGT GCGGCTGCTG
AATGTGCTCA CCCATACGGT CTGGTTTTTG CCCAGCGTGG CCGCCTGCTA CGCCATGCGC
AATCTCTTAG CCAAACCACA CAACAAGTTC TATCACGATT ACAAGGCCAT CGTGGCTGCC
GGCGCCGCTG CGGGCATCGG CGTCAATGCC CTCCCGCCGG TGCTGGACGC CATGGGCGAT
CCGCTCAAGA CGAAAACCAT CACCCTCACC TGCGGCAAAC TGACCACCGG CGTCACGGTT
CGGCCCTGGA CGGGCATCTT CATGCTGCGC AACACATCTA GCCCAGAAAC CTACTTCCAG
GCCGCCTTCC GCGTGCAGAG TCCATGGACG ATTCAGAATC CTGACGGAAC CTCACCCAAC
GCGGAGCTGA TTCTCAAAGA AGAGTGCTAT GTGTTCGATT TTGCGCCGGA TCGCGCCCTG
CGGCAGATTG CCGACTACAG TTGCCGCCTG AATGTGAATG AGGATGACCC GGAAAAGAAA
GTGGAGGAAT TTATCCACTT CCTGCCGGTG CTGGCGTATG ATGGGAGTTC AATGCGACAG
ATTGATGCCG CCGGCGTGCT GGAAATGGCC ATGAGCGGCA CCACCGCCAC CCTGCTGGCC
CGCCGCTGGG AAAGCGCGCT ATTGGTGAAT GTGGACAATG ACACTCTGCG GCGGCTGATA
ACCAACGAAC AGGCGATGCA GGCGCTGATG AACATTGAGG GCTTCCGCAA CCTCAATCAG
GAGATTGAAA CCATCATCAA CAAGTCGGAG GCCGTGAAAC GGCTGAAAAA AGAGGCCAAC
GACCGAGCGC TTTCCGCTCA AGAAAAGCGT GAGCTGACCG AAGAGGAGAA GGAATTCAAG
AGCAAGCGCA AACAGATTCA GGAAAAGCTC ATCAAGCTGG CGACGCGCAT CCCCATTTTT
ATGTATTTGA CCGACCATCG GGAACGAACG CTGCGCGATG TGATCACCCA ATTGGAACCG
GGATTGTTCA AGAAAGTTAC GGGGCTGACG GTGAAAGACT TTGAACTCCT CGTCAGCCTC
GGCGTCTTCA ACAGCGCGCT GATGAACGAT GCAGTGTACA AGTTCAAGCG GTATGAAGAC
CCAAGTCTGG TTTATACGGG TATTAACCGT CACGAAGGAG AAGATGTCGG ACTGTACGAT
ACCGTCTTGC GCCGCGCGGA ATATGAGGCG ACATTGGTGC ATGAGGAAAG ATAG
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| Protein sequence | MSNFFPPRPK VEPKIYAYKD TNPEYEGLLK IGYTTKSVQE RVAQQYPTLR PGGKLPYCIV
LEEPAIRNDG TVFTDRDVHR MLRINGIRNE GGEWFRCTVE QVRAAINAVR AGQLLEEQRS
LNFTMRPEQE AAVAKTMAYF QSYRRENGKP PHFLWNCKMR FGKTFAAYQL AKRMGWKKVL
VLTFKPAVQS AWEEDLRCHV DFQGWQFIKP GGLTYEQADK NKPIVCFGSF QDYLGRNPKT
GGIKAKNEWV HATHWHCVIF DEYHFGAWRE KAKDLFEGED EAERKASEGE AIDYFDEDIL
PITSDHYLYL SGTPFRAIAT GEFIEEQIYN WTYSDEQKAK EEWDDSNGPN PYAALPRMVL
MTYQLPDAIR EVAMQGEFNE FDLNVFFSAE GVGDKARFKY EDEVQKWLDL IRGAYLPTNL
DNLRLGAQKP PLPYSDVRLL NVLTHTVWFL PSVAACYAMR NLLAKPHNKF YHDYKAIVAA
GAAAGIGVNA LPPVLDAMGD PLKTKTITLT CGKLTTGVTV RPWTGIFMLR NTSSPETYFQ
AAFRVQSPWT IQNPDGTSPN AELILKEECY VFDFAPDRAL RQIADYSCRL NVNEDDPEKK
VEEFIHFLPV LAYDGSSMRQ IDAAGVLEMA MSGTTATLLA RRWESALLVN VDNDTLRRLI
TNEQAMQALM NIEGFRNLNQ EIETIINKSE AVKRLKKEAN DRALSAQEKR ELTEEEKEFK
SKRKQIQEKL IKLATRIPIF MYLTDHRERT LRDVITQLEP GLFKKVTGLT VKDFELLVSL
GVFNSALMND AVYKFKRYED PSLVYTGINR HEGEDVGLYD TVLRRAEYEA TLVHEER
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