Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0905 |
Symbol | |
ID | 5693740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 1057608 |
End bp | 1060169 |
Gene Length | 2562 bp |
Protein Length | 853 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641263502 |
Product | putative restriction enzyme |
Protein accession | YP_001528792 |
Protein GI | 158520922 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.710638 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAAGG CCTTCTTCCC TCCCCGGCCT GAATCGCGGC CCACGATTTA TGCATACGAG GATACCCATC CGCAGTACGC GGGTCTGCTC AAGGTCGGGT ACACAACCGT GGACGCACAG AAACGCGTTG CCCAGCAATA TCCGACCTTG CGTCCCGGCG CACCGCCCTA CCGAATCGTT CTGGAAGAAG CCGCCATGCG CGGCGACGGC ACGGTGTTTA CCGATAACGA CGTTCACCGC ATGCTGCGGA TCAACGGCGT CAAAAACCCG GAAGGCGAGT GGTTTTGCTG CACGGTCGCC CAGGTCAAGG CGGCTATCAT CGCCGTGCGC ACCGGTCAAC TCAACGAGGA AAACCGGTCC CTGGATTTTA CCATGCGGCC CGAGCAGGAA GCAGCGGTAG AAAAAACGGC CGCCTACTTC ACCGGCTGGC GCAAGGATAA GGGCAACCGG AATAAGCCGC CGCATTTTTT ATGGAACTGC AAGATGCGCT TCGGCAAGAC TTTTGCAGCC TATCAGTTGG CAAAAAAGAT GGGCTGGCGC AAGGTGCTGG TGCTCACTTT CAAACCGGCG GTACAAAGCG CCTGGGAAGA GGATTTAAAG TGCCACGTGG ATTTTGCGGG GTGGCAGTTT GTTGCTTCGC ACGATTTGCA TACTGACGGT GAACCGAAGA TAAAACCGCC TTTGGTCTGT TTTGGTTCGT TTCAGGACTA TCTGGGCCGC AACCCCGATA CGGGCGGCAT CAAGTCAAAG AACGAATGGG TTCACACCAC CAACTGGGAT TGCGTTATTC TGGACGAATA CCACTACGGC GCCTGGCGGG AGACCGCCAA AGAGCTGTTT GAGGCCGAGG ACAAGAAAGA GGTCGCGTTC GGTGTGGGGC AAGGCGCTGA GTTCCTGAAA GAGCGGGACG AAGAGATAGC CGACATCATG CCGATCACCA CGAACGGTTA TCTCTACCTG TCCGGCACGC CGTTTCGGGC AATTGCTTCC GGCGAATTCA TCGAAGAGCA GATTTTCAAC TGGACCTATT CCGATGAACA GCGGGCGAAA AGCGCCTGGA AGGGTCCGGG CAACCCATAT GTCGCTTTGC CAAGGATGGT GTTGCTGACA TACCAGCTTC CGGACGCGAT TCGGGAAATC GCCATGCAGG GAGAGTTTAA CGAGTTCGAC CTGAATGTCT TTTTTTCCGC CGAGGGGATC GGCAACAAGG CCAAATTCAA GTACGCCAAC GAGGTTCAGA AATGGCTTGA CCTGATCCGG GGCGCGTTCC TGCCGACCAG CGTCGACAGC CTGAAACTCG GCGCGCGGAA GCCGCCGATG CCGTTCTCGG ATGTGCGGCT GTTGGGCGTG CTTTCGCATT CCTTCTGGTT TTTGCCGAGC GTGGCGGCCT GTCACGCCAT GCGCAATCTG CTGGCCAAAA GGCAGAACCG GTTCTACCAC GACTACAAGG TCATCGTAGC GGCGGGGAAC GCCGCCGGAA TCGGCGTGGC GGCCCTGCCC CCGGTCCAGG AGGCAATGGA CGATCCCCTG ACCACCAAAA CGATAACCCT TTCCTGCGGC AAGCTGACCA CCGGCGTGAC GGTCAAGCCG TGGACGGGGA TTCTGATGCT GCGCAACGCA TCTGTCCCGG AGACCTATTT TCAGGCGGCT TTCCGGGTGC AATCGCCCTG GACGGTGCGC AACCCGGACG GCGCGTCTCC CAACTCCGAG CAGATTATCA AGAAGGAATG TTATGTTTTT GACTTTGCGC CGGACCGGGC CTTGCGCCAG ATTGCCGATT ACAGTTGCCG GTTGAACGTC AACGAAGAGA ACCAGGAAAA AAAGGTGGAG GAGTTTATCA GTTTCCTGCC GGTTCTGGCG TATGACGGCA GTTCCATGAA ACAGATTGAC GCTGCCGGGA TTCTCGACAT GGCCATGAGC GGCACAACGG CCACCCTGCT GGCCCGACGA TGGGAAAGCG CCTTGCTGGT GAATGTGGAC AACGACACCC TGCATCGCCT GATGGATAAT AAAAAAGCCA TGGAAGCCCT TATGAGCATT GAAGGGTTCC GCACCCTGAA TCAGGACATC GAAACCATCA TCAACAAATC GGAAGCCGTG AAGAAAGCCC GCAAGGAGGC CAACGATCAG GAACTGTCCG CACAACAGAA GAAGGAACTT TCCCAGGAGG AAAAGGAATA CAAGAGCCGG AGAAAGCAGA TCCAGGAAAA GATCATCAAG TTCGCTACAC GAATTCCCAT CTTCATGTAC CTGACGGACT TTCGCGAGCG GACCCTGAAG GACGTGATTA CTCAACTGGA GCCGGGCCTG TTCAAGAAGG TTACGGGCCT GACCGTGACC GACTTCGAGC TGCTGGTCAG CCTGGGGCTG TTCAACAGCG CCCTGATGAA TGATGCGATT TACAAGTTCA AGCGCTATGA AGATGCCAGC CTGAGTTACA TTGGAATCTA CAAACACGAG GGTGAGGACA TCGGCCTTTA CGATACGGTC ATCACCCGAA AGGATGCGAC CGGCATATTC GAGAACATTC CAGTCAACCC CCTCATTCCA CCAAGTTCCT GA
|
Protein sequence | MSKAFFPPRP ESRPTIYAYE DTHPQYAGLL KVGYTTVDAQ KRVAQQYPTL RPGAPPYRIV LEEAAMRGDG TVFTDNDVHR MLRINGVKNP EGEWFCCTVA QVKAAIIAVR TGQLNEENRS LDFTMRPEQE AAVEKTAAYF TGWRKDKGNR NKPPHFLWNC KMRFGKTFAA YQLAKKMGWR KVLVLTFKPA VQSAWEEDLK CHVDFAGWQF VASHDLHTDG EPKIKPPLVC FGSFQDYLGR NPDTGGIKSK NEWVHTTNWD CVILDEYHYG AWRETAKELF EAEDKKEVAF GVGQGAEFLK ERDEEIADIM PITTNGYLYL SGTPFRAIAS GEFIEEQIFN WTYSDEQRAK SAWKGPGNPY VALPRMVLLT YQLPDAIREI AMQGEFNEFD LNVFFSAEGI GNKAKFKYAN EVQKWLDLIR GAFLPTSVDS LKLGARKPPM PFSDVRLLGV LSHSFWFLPS VAACHAMRNL LAKRQNRFYH DYKVIVAAGN AAGIGVAALP PVQEAMDDPL TTKTITLSCG KLTTGVTVKP WTGILMLRNA SVPETYFQAA FRVQSPWTVR NPDGASPNSE QIIKKECYVF DFAPDRALRQ IADYSCRLNV NEENQEKKVE EFISFLPVLA YDGSSMKQID AAGILDMAMS GTTATLLARR WESALLVNVD NDTLHRLMDN KKAMEALMSI EGFRTLNQDI ETIINKSEAV KKARKEANDQ ELSAQQKKEL SQEEKEYKSR RKQIQEKIIK FATRIPIFMY LTDFRERTLK DVITQLEPGL FKKVTGLTVT DFELLVSLGL FNSALMNDAI YKFKRYEDAS LSYIGIYKHE GEDIGLYDTV ITRKDATGIF ENIPVNPLIP PSS
|
| |