Gene Ajs_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0197 
Symbol 
ID4671536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp214296 
End bp215984 
Gene Length1689 bp 
Protein Length562 aa 
Translation table11 
GC content56% 
IMG OID639837329 
ProductEco57I restriction endonuclease 
Protein accessionYP_984528 
Protein GI121592632 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCA CCCTGCAAGC CCCCTTCGCC CTGCATGGCC GCAACCCCGA TGTGCTGACC 
TGCATTGCCA ATCTGTCGAA CGACGAGGTT TTCACACCCC CAGAACTGGC CGGTCGAATG
CTGGACTTGC TGGCCAATGC CTGGGCTGCC GACCACGGTG GCGCAAGCCT ATGGGCGGAT
AAAACCGTGC GTTTTTTGGA CCCCTTCACC AAATCGGGCG TGTTTCTGCG CGAAATCACC
AGCCGCCTGA CCGCGGGGCT GGCGCAAGAA ATCCCCGACT TGCCAACACG CGTAAACCAC
ATCCTGACGC AGCAGGTGTT TGGCATTGCC ATCACGCGCC TGACCAGTTT GCTGGCGCGG
CGCAGCGTGT ATTGCTCCAA ATACGCCAAC AGCGCGCATT CCATCGCCCA TGGCTTTGCA
AGTGACATGG GCAACATTTG GTTTGAGCGC ACCGAACACA CCTGGGTACA GGGCAAATGC
CGGTTTTGCG GCGCCAGCCA GGCCGCGCTA GACCGTGGCG AGGGGCTGGA AACGCACGCC
TACGCCTTTA TCCATACCGA CAACATCAAG GCTCGCATGG CCGAGTTATT TGGAGCAGAC
ATGCAATTCG ACGTGATCAT TGGCAACCCG CCATACCAGT TAAGCGATGG CGGCTATGGC
ACCAGTGCCG CGCCCATTTA CCAATTGTTC GTGGAGCAGG CAAAGAAGCT GGAGCCGCGT
TACTTATCGA TGGTGATTCC AGCGCGCTGG TTTGCGGGTG GCAAAGGGTT GGACGAGTTC
CGGGAGTCGA TGCTTTCCGA CAATCGTTTG CGCTCGATGG ATGATTTTCT GAGTGCATCG
GAGGTTTTTC CGGGAGTCGG CCTCAAGGGT GGCGTGTGCT ATTTCCTTTG GAACCGTGAC
CATCCAGGCC TGTGCAACGT GAGCACCCAT TTCAAGGACT GGCCCACTTC TACGGCCACC
CGTCCGCTGA TGGAAAACGG GGCCGACATC TTCATCCGCT TCAATGAAGG GCTGTCGATT
TTGAAGAAGG TGATGGCGAC CGAGCAGTCA GTCAGTCAGT CAGTCAGTCA GTCAGTCAGT
CAGAAGCATG CACTGAAGCT GCCTGAAAGC AAGCGTTTTG ATCTGTTGGT TAGCTCTCTA
CGCCCGTTCG GATTTCGTAC CTACTTTCGA GGCCGCGCAC GCAAGCGCCA AGGTGATGTG
GCGATTTATC AAAACGGCGG AACCGGCTAC GTTGCCCAAG AGGAAGTTGA AACCGGTACC
GAACTCATCG ACAAATGGAA AATTTATGTG GGCCGTGCCG CGCCAGGCAC CGGCAACCGC
GACACCTACC CGCACCGCAT TCTGAGCACT CCGTTCATTG GCGAACCCGG CAGTATTTGC
TCTGAAACCT ATTTGTGCAT TGGCCCGTTT GACACCCAAA CTGAGGCGGA AAGCGCCCTG
TCCTACCTCA CTTGCCGACT AACGCGCCTG TTGATTCTTC TGCACAAGCC CTCGCAAGAC
ACTACACGTA AGGTTTACAC CTTCGTGCCC ACGCAAGACT GGACAAAGCG CTGGACGGAC
GAAGACCTGT ACGCCAAATA TGGCATTGAA CCCCATGAGA TTGAGTTCAT TGAAAAAGTC
GTGCGGCCTA TGGATTTAAA CAGTGATTTG CTGGGTGACG TTACGGTGGA TGAAAGTGAT
GATGAATAA
 
Protein sequence
MSITLQAPFA LHGRNPDVLT CIANLSNDEV FTPPELAGRM LDLLANAWAA DHGGASLWAD 
KTVRFLDPFT KSGVFLREIT SRLTAGLAQE IPDLPTRVNH ILTQQVFGIA ITRLTSLLAR
RSVYCSKYAN SAHSIAHGFA SDMGNIWFER TEHTWVQGKC RFCGASQAAL DRGEGLETHA
YAFIHTDNIK ARMAELFGAD MQFDVIIGNP PYQLSDGGYG TSAAPIYQLF VEQAKKLEPR
YLSMVIPARW FAGGKGLDEF RESMLSDNRL RSMDDFLSAS EVFPGVGLKG GVCYFLWNRD
HPGLCNVSTH FKDWPTSTAT RPLMENGADI FIRFNEGLSI LKKVMATEQS VSQSVSQSVS
QKHALKLPES KRFDLLVSSL RPFGFRTYFR GRARKRQGDV AIYQNGGTGY VAQEEVETGT
ELIDKWKIYV GRAAPGTGNR DTYPHRILST PFIGEPGSIC SETYLCIGPF DTQTEAESAL
SYLTCRLTRL LILLHKPSQD TTRKVYTFVP TQDWTKRWTD EDLYAKYGIE PHEIEFIEKV
VRPMDLNSDL LGDVTVDESD DE