21 homologs were found in PanDaTox collection
for query gene Gobs_2769 on replicon NC_013757
Organism: Geodermatophilus obscurus DSM 43160



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013757  Gobs_2769  Phytanoyl-CoA dioxygenase  100 
 
 
395 aa  804    Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1813  phytanoyl-CoA dioxygenase  66.06 
 
 
393 aa  526  1e-148  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.864664 
 
 
-
 
NC_009338  Mflv_2614  phytanoyl-CoA dioxygenase  61.22 
 
 
387 aa  477  1e-133  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_3967  phytanoyl-CoA dioxygenase  61.03 
 
 
400 aa  474  1e-133  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3772  Phytanoyl-CoA dioxygenase  59.64 
 
 
395 aa  473  1e-132  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.561015  normal  0.900413 
 
 
-
 
NC_009664  Krad_4033  Phytanoyl-CoA dioxygenase  61.93 
 
 
396 aa  474  1e-132  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.436862 
 
 
-
 
NC_011369  Rleg2_3484  Phytanoyl-CoA dioxygenase  59.63 
 
 
395 aa  461  1e-129  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.660208 
 
 
-
 
NC_013441  Gbro_3592  Phytanoyl-CoA dioxygenase  58.95 
 
 
399 aa  441  1e-123  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4205  Phytanoyl-CoA dioxygenase  54.43 
 
 
404 aa  417  9.999999999999999e-116  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.351992 
 
 
-
 
NC_011365  Gdia_2406  Phytanoyl-CoA dioxygenase  56.22 
 
 
398 aa  416  9.999999999999999e-116  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_1278  phytanoyl-CoA dioxygenase  53.45 
 
 
389 aa  393  1e-108  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.0445475  normal  0.279697 
 
 
-
 
NC_008786  Veis_1851  phytanoyl-CoA dioxygenase  56.69 
 
 
391 aa  386  1e-106  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.213428 
 
 
-
 
NC_007802  Jann_1428  phytanoyl-CoA dioxygenase  55.35 
 
 
382 aa  384  1e-105  Jannaschia sp. CCS1  Bacteria  normal  0.120366  normal  0.809947 
 
 
-
 
NC_010622  Bphy_2885  phytanoyl-CoA dioxygenase  51.42 
 
 
398 aa  379  1e-104  Burkholderia phymatum STM815  Bacteria  normal  0.971655  hitchhiker  0.000000189088 
 
 
-
 
NC_008043  TM1040_3531  phytanoyl-CoA dioxygenase  50.54 
 
 
393 aa  374  1e-102  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_26210  Phytanoyl-CoA dioxygenase protein  53.12 
 
 
398 aa  364  1e-99  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_006693  CNH03160  conserved hypothetical protein  42.44 
 
 
433 aa  315  7e-85  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.661561  n/a   
 
 
-
 
NC_006692  CNG03000  conserved hypothetical protein  43.44 
 
 
394 aa  313  4.999999999999999e-84  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.472148  n/a   
 
 
-
 
BN001301  ANIA_06051  phytanoyl-CoA dioxygenase family protein (AFU_orthologue; AFUA_2G09620)  42.93 
 
 
410 aa  309  5.9999999999999995e-83  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
NC_007336  Reut_C6398  phytanoyl-CoA dioxygenase  28.08 
 
 
288 aa  53.9  0.000005  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0569  hypothetical protein  25.35 
 
 
284 aa  50.1  0.00007  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
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