| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3531 |
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| Symbol | |
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| ID | 4075210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 566500 |
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| End bp | 567681 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638005046 |
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| Product | phytanoyl-CoA dioxygenase |
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| Protein accession | YP_611765 |
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| Protein GI | 99078507 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGATA CCGTCGATAA CACCATCGCC TACTACGACC CCGATAACTG TGATCTGGGA
GAGTTCAAGG CACTCATAGG TCAAGCGACA AGGAGCGAGC AGGTGCCGCT TGCGGCCGCC
ATCGAAAAGA ACATTCCGAT CTACGACATG GCAAAGCTGC GTCCGGCTCT CGAAGATGAC
AGGACCCGTA GAGGGATCAT GGCGGAATGG GCACAGGTCC TGCGCTCCGG TGCGGGGGTC
GTGGCCCTAA AGGGAGCCTA TGCCGATACG GCAGTTCTGG ATGAGGCAAC CCGCATTTAC
GAAGGAATTA TTGCGGAAGA GAAGCAGGGA ACTGGGGGCG CAGGCGATCA CTTCGCAGCG
TCGGGAGCGA ACGATCGGAT ATGGAACTCG CTTCAGAAGC TCTGCGAAGC CTCGCCCGAC
GCGTTTCTGA ATTATTTCGC AAACACTTCT ATTGCGGCAG TTTGCGAAGC TTGGCTGGGG
CCGAATTATC AGATGACCGC GCAGGTAAAC CTCGTGCACC CCGGCGGCGC AGCTCAGCAG
GCGCATCGCG ACTATCATCT GGGATTTCAA ACCTCCGATG TCAGCGCGTC CTATCCTGCG
CACGTCCACG ACGTCTCGCC AATTCTGACG CTTCAGGGCG CTGTCGCCCA TTCCGACATG
CCGTTAGAAA GCGGCCCGAC CAAACTGCTG CCCTTTTCGC AAGCATATCG TCCGGGCTAT
GCAGCATGGC GCCGGGATGA CTTTCGGGCC CTTTTCGAAG AACACCATGT GCAGTTGCCG
CTAGCCAAGG GAGATGCCGT GTTTTTCTCC CCCGCTTTGT TTCACGCGGC CGGAGCCAAC
ACGAGCCACG ACATTCACCG CTTCGCCAAC CTTTTGCAGG TGTCATCGGC CTTCGGTCGC
GCAATGGAGA CAGTCGATCG GGACAGAATG TGTAGACTGA TTTTCCCGTA TGCGTTTCAG
GCCAAGCAAA CAAACAAGCT CAGCGTTGCC GAATTGTCTG CGGCAATAGC TGCGACCGCC
GAAGGGTACT CGTTTCCGAC AAATCTCGAT CGCGATCCGC CGACAAACGG TCTAGCACCG
GAAACCCAAG CCGCCTTCTT TCGGCGGGCA TTGGTTGAAG GGATCGAGGA GCATGCCTTC
GCCGAGCGGC TCGATCAAAT GAGTAGTGCA AGAATGGCAT AA
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| Protein sequence | MKDTVDNTIA YYDPDNCDLG EFKALIGQAT RSEQVPLAAA IEKNIPIYDM AKLRPALEDD
RTRRGIMAEW AQVLRSGAGV VALKGAYADT AVLDEATRIY EGIIAEEKQG TGGAGDHFAA
SGANDRIWNS LQKLCEASPD AFLNYFANTS IAAVCEAWLG PNYQMTAQVN LVHPGGAAQQ
AHRDYHLGFQ TSDVSASYPA HVHDVSPILT LQGAVAHSDM PLESGPTKLL PFSQAYRPGY
AAWRRDDFRA LFEEHHVQLP LAKGDAVFFS PALFHAAGAN TSHDIHRFAN LLQVSSAFGR
AMETVDRDRM CRLIFPYAFQ AKQTNKLSVA ELSAAIAATA EGYSFPTNLD RDPPTNGLAP
ETQAAFFRRA LVEGIEEHAF AERLDQMSSA RMA
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