| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3967 |
|---|
| Symbol | |
|---|
| ID | 4646959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 4241278 |
|---|
| End bp | 4242480 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639807429 |
|---|
| Product | phytanoyl-CoA dioxygenase |
|---|
| Protein accession | YP_954750 |
|---|
| Protein GI | 120404921 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATTGCGG TGCCGATCAC AGCAAGACTA AGCGGCGTGG CTGCACCCAT CAACACCGAA
TCAGCGGCGT GGCTCGCAGA TTCGGACTTC GATCTCGACG AGTTCCGCGC CCAGGTCGAG
TGCGACACCG ATCCGGCCGA CTACCCGTTC GCCGATGACG TGCGCAGCAA TGTTCTCGTC
TACTCCGCGA CGACGTTGGC GCGCGGGTCC GACCGCCGCG GGCTGCAGGC GGAGTTGATC
CGCGCGCTGG ACCGCGGACC CGGCGTTGTG GTGTTCACCG GGGCGTTCGA CGCCGACGTG
GTGGACCGCG CCAGTGAGGC GTTCTTCGCC ATCATCGAGG CGCAGCGCAA GGCCGGGGAA
GCCGGCGGCG ACCATTTCGG CGCGCCGGGC GCCAACGACC GCATCTGGAA CGCGGCGCAG
AAACTGGCGC TGCACGACCC GCGGGTTTTC GCCGACTACT ACGCCAACGA CGCCCTCGCG
ATCATCTGCC AGGCCTGGCT GGGTCCGCGC TACCAGGTCA CCTCACAGGT CAACGTCGTC
AATCCCGGCG GCAAGGCTCA GGTCCCGCAC CGCGACTATC ACCTCGGCTT CGTCCCCGAG
GAGCACCTGG CCGAATACCC GGCGCACATC CACCGCACGT CGCCGACGCT GACGTTGCAG
GGCGCGGTGG CGCACTGCGA CATGCCCGTC GACAGTGGAC CGACCATGCT GCTGCCCCAC
TCGCAGCGGT TCACCGGCGG GTACGTCGCG TTCCACCGGC CCGGGTTCCT CGACTACTTC
GCCTCCCACC ACGTGCAGCT GCCGTTACGC AAGGGCGATG CCGTGTTCTT CAACCCGGCG
CTGTATCACG CAGCGGGAGC GAATGTTTCC ACCGACATAC GGCGGATGGC GAACCTGATG
CAGATCAGCT CGCCGTTCGG CCGGGCGATG GAGGCGATGG ACCGCACCGC GATGGTGCGC
GCCGTCTACC CAGTCCTGCG GGCGATGCAG GCCGCGGGCC GGCCACCGCG CGAGGTGGAG
AACGTCGTCG TCGCCACCGC CGAGGGCTAT GCCTTCCCCA CCAATCTCGA CAGCGATCAA
CCGGTCGGCA GCCTCGCTCC GCCCAGCCAG GTCGACACCG TACTCGACGC ACTGGCCCGA
CACCTCACCG AGGAAGAACT CGACATCGCG CTTCGCGCGC AGAACGAACG GAGAATCCCA
TGA
|
|---|
| Protein sequence | MIAVPITARL SGVAAPINTE SAAWLADSDF DLDEFRAQVE CDTDPADYPF ADDVRSNVLV
YSATTLARGS DRRGLQAELI RALDRGPGVV VFTGAFDADV VDRASEAFFA IIEAQRKAGE
AGGDHFGAPG ANDRIWNAAQ KLALHDPRVF ADYYANDALA IICQAWLGPR YQVTSQVNVV
NPGGKAQVPH RDYHLGFVPE EHLAEYPAHI HRTSPTLTLQ GAVAHCDMPV DSGPTMLLPH
SQRFTGGYVA FHRPGFLDYF ASHHVQLPLR KGDAVFFNPA LYHAAGANVS TDIRRMANLM
QISSPFGRAM EAMDRTAMVR AVYPVLRAMQ AAGRPPREVE NVVVATAEGY AFPTNLDSDQ
PVGSLAPPSQ VDTVLDALAR HLTEEELDIA LRAQNERRIP
|
|---|
| |