More than 300 homologs were found in PanDaTox collection
for query gene Cphy_1091 on replicon NC_010001
Organism: Clostridium phytofermentans ISDg



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010001  Cphy_1091  binding-protein-dependent transport systems inner membrane component  100 
 
 
298 aa  610  9.999999999999999e-175  Clostridium phytofermentans ISDg  Bacteria  normal  0.124579  n/a   
 
 
-
 
NC_011830  Dhaf_1668  binding-protein-dependent transport systems inner membrane component  40.58 
 
 
294 aa  223  2e-57  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2161  binding-protein-dependent transport systems inner membrane component  39.37 
 
 
294 aa  223  4e-57  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_0493  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
295 aa  223  4e-57  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.0266791 
 
 
-
 
NC_009012  Cthe_2125  binding-protein-dependent transport systems inner membrane component  37.28 
 
 
303 aa  197  2.0000000000000003e-49  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1391  binding-protein-dependent transport systems inner membrane component  32.03 
 
 
276 aa  125  1e-27  Clostridium phytofermentans ISDg  Bacteria  normal  0.0775264  n/a   
 
 
-
 
NC_012669  Bcav_2832  binding-protein-dependent transport systems inner membrane component  26.9 
 
 
324 aa  119  6e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.051903  normal 
 
 
-
 
NC_010001  Cphy_0594  binding-protein-dependent transport systems inner membrane component  30.38 
 
 
293 aa  119  7e-26  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.0000740706  n/a   
 
 
-
 
NC_012669  Bcav_4196  binding-protein-dependent transport systems inner membrane component  27.47 
 
 
292 aa  117  3e-25  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7904  binding-protein-dependent transport systems inner membrane component  30.7 
 
 
271 aa  113  5e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00882  L-arabinose transport system permease protein AraQ  27.24 
 
 
278 aa  112  1.0000000000000001e-23  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0407955  n/a   
 
 
-
 
NC_011071  Smal_2681  Monosaccharide-transporting ATPase  30.92 
 
 
278 aa  110  2.0000000000000002e-23  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.515759  normal 
 
 
-
 
NC_013172  Bfae_05110  carbohydrate ABC transporter membrane protein  31.15 
 
 
295 aa  111  2.0000000000000002e-23  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1101  binding-protein-dependent transport systems inner membrane component  24.25 
 
 
280 aa  109  7.000000000000001e-23  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7693  putative transmembrane permease component of ABC transporter  28.57 
 
 
286 aa  108  1e-22  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.673988 
 
 
-
 
NC_013521  Sked_21170  carbohydrate ABC transporter membrane protein  29 
 
 
302 aa  108  1e-22  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.281989  normal  0.140209 
 
 
-
 
NC_008541  Arth_3148  binding-protein-dependent transport systems inner membrane component  30.28 
 
 
311 aa  107  2e-22  Arthrobacter sp. FB24  Bacteria  decreased coverage  0.00417428  n/a   
 
 
-
 
NC_013526  Tter_2207  binding-protein-dependent transport systems inner membrane component  31.33 
 
 
299 aa  107  2e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0410  Monosaccharide-transporting ATPase  29.07 
 
 
288 aa  107  2e-22  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.727558  n/a   
 
 
-
 
NC_010001  Cphy_0528  binding-protein-dependent transport systems inner membrane component  30.05 
 
 
281 aa  107  2e-22  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00417189  n/a   
 
 
-
 
NC_010003  Pmob_1378  binding-protein-dependent transport systems inner membrane component  28.33 
 
 
743 aa  107  2e-22  Petrotoga mobilis SJ95  Bacteria  normal  0.445152  n/a   
 
 
-
 
NC_013515  Smon_1044  binding-protein-dependent transport systems inner membrane component  27.2 
 
 
277 aa  106  4e-22  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_012848  Rleg_5052  binding-protein-dependent transport systems inner membrane component  26.91 
 
 
278 aa  107  4e-22  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.482027  normal 
 
 
-
 
NC_010003  Pmob_0142  binding-protein-dependent transport systems inner membrane component  29.54 
 
 
297 aa  106  4e-22  Petrotoga mobilis SJ95  Bacteria  normal  0.714989  n/a   
 
 
-
 
NC_013172  Bfae_04910  ABC-type sugar transport system, permease component  28.76 
 
 
277 aa  106  6e-22  Brachybacterium faecium DSM 4810  Bacteria  normal  0.649661  n/a   
 
 
-
 
NC_009486  Tpet_0634  binding-protein-dependent transport systems inner membrane component  29.06 
 
 
284 aa  105  6e-22  Thermotoga petrophila RKU-1  Bacteria  normal  0.146391  n/a   
 
 
-
 
NC_010483  TRQ2_0659  binding-protein-dependent transport systems inner membrane component  29.06 
 
 
284 aa  105  6e-22  Thermotoga sp. RQ2  Bacteria  normal  0.0401383  n/a   
 
 
-
 
NC_010577  XfasM23_1548  monosaccharide-transporting ATPase  28.76 
 
 
278 aa  105  7e-22  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0775  binding-protein-dependent transport systems inner membrane component  27.78 
 
 
303 aa  105  8e-22  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1657  binding-protein-dependent transport systems inner membrane component  30.67 
 
 
284 aa  105  9e-22  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.354053  normal  0.174244 
 
 
-
 
NC_006274  BCZK1636  sugar ABC transporter, permease  31.14 
 
 
277 aa  104  2e-21  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1901  sugar ABC transporter, permease protein  31.14 
 
 
277 aa  103  3e-21  Bacillus cereus ATCC 10987  Bacteria  normal  0.682079  n/a   
 
 
-
 
NC_008528  OEOE_0255  ABC-type maltose transport system, permease component  25.68 
 
 
276 aa  103  3e-21  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3073  sugar ABC transporter permease  28.46 
 
 
277 aa  103  3e-21  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.146884 
 
 
-
 
NC_012669  Bcav_3574  Monosaccharide-transporting ATPase  29.81 
 
 
290 aa  103  4e-21  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.156852  normal 
 
 
-
 
NC_011831  Cagg_0727  binding-protein-dependent transport systems inner membrane component  26.82 
 
 
279 aa  103  4e-21  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000188602  normal 
 
 
-
 
NC_012028  Hlac_2864  binding-protein-dependent transport systems inner membrane component  31.09 
 
 
278 aa  103  4e-21  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_013205  Aaci_0076  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
275 aa  103  4e-21  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1271  binding-protein-dependent transport systems inner membrane component  28.14 
 
 
274 aa  103  4e-21  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_0396  binding-protein-dependent transport systems inner membrane component  29.55 
 
 
722 aa  103  4e-21  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.0626826  n/a   
 
 
-
 
NC_013526  Tter_2301  binding-protein-dependent transport systems inner membrane component  30.54 
 
 
285 aa  102  5e-21  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.866945  n/a   
 
 
-
 
NC_011899  Hore_20610  binding-protein-dependent transport systems inner membrane component  29.39 
 
 
273 aa  102  7e-21  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1729  binding-protein-dependent transport systems inner membrane component  25.25 
 
 
275 aa  102  9e-21  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_2748  binding-protein dependent transport system inner membrane protein  26.37 
 
 
306 aa  102  1e-20  Anabaena variabilis ATCC 29413  Bacteria  normal  0.925228  normal  0.18236 
 
 
-
 
NC_012669  Bcav_3791  binding-protein-dependent transport systems inner membrane component  25.94 
 
 
300 aa  102  1e-20  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17142  normal 
 
 
-
 
NC_011661  Dtur_1730  binding-protein-dependent transport systems inner membrane component  26.76 
 
 
285 aa  101  1e-20  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.0000816013  n/a   
 
 
-
 
NC_010513  Xfasm12_1605  ABC transporter sugar permease  28.33 
 
 
278 aa  102  1e-20  Xylella fastidiosa M12  Bacteria  normal  0.732965  n/a   
 
 
-
 
NC_013411  GYMC61_2846  binding-protein-dependent transport systems inner membrane component  29.86 
 
 
270 aa  101  1e-20  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_3955  binding-protein-dependent transport systems inner membrane component  27.92 
 
 
274 aa  102  1e-20  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4881  binding-protein-dependent transport systems inner membrane component  28.51 
 
 
295 aa  101  2e-20  Conexibacter woesei DSM 14684  Bacteria  normal  0.48115  normal 
 
 
-
 
NC_012669  Bcav_0320  binding-protein-dependent transport systems inner membrane component  27.71 
 
 
300 aa  100  2e-20  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_1592  binding-protein-dependent transport systems inner membrane component  27.39 
 
 
283 aa  100  3e-20  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0512  binding-protein-dependent transport systems inner membrane component  28.08 
 
 
298 aa  100  3e-20  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_4048  binding-protein-dependent transport systems inner membrane component  28.38 
 
 
287 aa  100  4e-20  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3806  binding-protein-dependent transport systems inner membrane component  23.55 
 
 
300 aa  99.4  7e-20  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_12076  sugar ABC transporter membrane protein  25.94 
 
 
280 aa  99.4  7e-20  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B4734  putative glycerol-3-phosphate ABC transporter, permease protein  25.17 
 
 
273 aa  99.4  7e-20  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_0479  glycerol-3-phosphate ABC transporter, permease  24.83 
 
 
273 aa  99  8e-20  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0481  glycerol-3-phosphate ABC transporter, permease  24.83 
 
 
273 aa  99  8e-20  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_2094  binding-protein dependent transport system inner membrane protein  24.67 
 
 
279 aa  99  8e-20  Anabaena variabilis ATCC 29413  Bacteria  normal  0.179988  hitchhiker  0.00000184258 
 
 
-
 
NC_011773  BCAH820_0624  putative glycerol-3-phosphate ABC transporter, permease protein  24.83 
 
 
273 aa  99  8e-20  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_003909  BCE_0631  glycerol-3-phosphate ABC transporter, permease protein, putative  24.83 
 
 
273 aa  99  9e-20  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0338  monosaccharide-transporting ATPase  27.57 
 
 
701 aa  99  9e-20  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0320  monosaccharide-transporting ATPase  28.04 
 
 
701 aa  99  9e-20  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0638  binding-protein-dependent transport systems inner membrane component  28.18 
 
 
295 aa  99  9e-20  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0605  putative glycerol-3-phosphate ABC transporter, permease protein  25.17 
 
 
273 aa  99  9e-20  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0537  glycerol-3-phosphate ABC transporter permease  24.83 
 
 
273 aa  98.6  1e-19  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0568  glycerol-3-phosphate ABC transporter permease protein  24.83 
 
 
273 aa  98.6  1e-19  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011981  Avi_7346  ABC transporter membrane spanning protein (sugar)  26.71 
 
 
278 aa  98.6  1e-19  Agrobacterium vitis S4  Bacteria  normal  0.477248  n/a   
 
 
-
 
NC_011368  Rleg2_5335  binding-protein-dependent transport systems inner membrane component  26.03 
 
 
278 aa  98.2  1e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.716321  normal 
 
 
-
 
NC_013721  HMPREF0424_1289  ABC transporter, permease protein  27 
 
 
303 aa  98.6  1e-19  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_011658  BCAH187_A0699  putative glycerol-3-phosphate ABC transporter, permease protein  24.83 
 
 
273 aa  98.6  1e-19  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2818  binding-protein-dependent transport systems inner membrane component  31.48 
 
 
311 aa  98.6  1e-19  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.316897  normal 
 
 
-
 
NC_013205  Aaci_0915  binding-protein-dependent transport systems inner membrane component  30.36 
 
 
280 aa  98.2  1e-19  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_0205  binding-protein-dependent transport systems inner membrane component  30.74 
 
 
279 aa  97.8  2e-19  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.67338  normal  0.16615 
 
 
-
 
NC_013526  Tter_2317  binding-protein-dependent transport systems inner membrane component  27.39 
 
 
299 aa  97.4  2e-19  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1391  binding-protein-dependent transport systems inner membrane component  27.05 
 
 
270 aa  98.2  2e-19  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_12340  sugar-transport integral membrane protein ABC transporter uspB  29.7 
 
 
274 aa  97.8  2e-19  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2601  binding-protein-dependent transport systems inner membrane component  24.92 
 
 
275 aa  97.4  2e-19  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.260696  normal 
 
 
-
 
NC_004116  SAG0036  sugar ABC transporter, permease protein  28.19 
 
 
276 aa  97.1  3e-19  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.385725  n/a   
 
 
-
 
NC_011899  Hore_00400  binding-protein-dependent transport systems inner membrane component  30.33 
 
 
463 aa  97.1  3e-19  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013201  Hmuk_3224  binding-protein-dependent transport systems inner membrane component  32.94 
 
 
283 aa  97.4  3e-19  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_010003  Pmob_0956  monosaccharide-transporting ATPase  27.83 
 
 
277 aa  97.1  3e-19  Petrotoga mobilis SJ95  Bacteria  normal  0.0922285  n/a   
 
 
-
 
NC_011886  Achl_1751  binding-protein-dependent transport systems inner membrane component  32.29 
 
 
313 aa  97.1  3e-19  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000624363 
 
 
-
 
NC_010184  BcerKBAB4_0482  binding-protein-dependent transport systems inner membrane component  24.83 
 
 
273 aa  97.1  3e-19  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2616  binding-protein-dependent transport systems inner membrane component  27.75 
 
 
294 aa  96.7  4e-19  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000583333  n/a   
 
 
-
 
NC_009939  Dgeo_2917  ABC-type sugar transport system, permease component  31.98 
 
 
273 aa  97.1  4e-19  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_013172  Bfae_06290  carbohydrate ABC transporter membrane protein  29.79 
 
 
291 aa  96.3  5e-19  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2452  binding-protein-dependent transport systems inner membrane component  26.72 
 
 
299 aa  96.3  5e-19  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0352539  n/a   
 
 
-
 
NC_011881  Achl_4623  binding-protein-dependent transport systems inner membrane component  28.88 
 
 
285 aa  96.7  5e-19  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011831  Cagg_2265  binding-protein-dependent transport systems inner membrane component  29.55 
 
 
308 aa  96.3  5e-19  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.0000413276 
 
 
-
 
NC_014210  Ndas_2035  binding-protein-dependent transport systems inner membrane component  26.28 
 
 
291 aa  96.3  5e-19  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0974901  normal  0.381629 
 
 
-
 
NC_014158  Tpau_1638  binding-protein-dependent transport systems inner membrane component  26.94 
 
 
311 aa  96.3  6e-19  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.155632  n/a   
 
 
-
 
NC_009664  Krad_2167  binding-protein-dependent transport systems inner membrane component  26.67 
 
 
295 aa  96.3  6e-19  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3946  binding-protein-dependent transport systems inner membrane component  27.87 
 
 
297 aa  96.3  6e-19  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0330031 
 
 
-
 
NC_011886  Achl_2662  binding-protein-dependent transport systems inner membrane component  26.27 
 
 
304 aa  95.9  7e-19  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009616  Tmel_0692  binding-protein-dependent transport systems inner membrane component  28.33 
 
 
390 aa  95.9  7e-19  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1014  binding-protein-dependent transport systems inner membrane component  27.83 
 
 
273 aa  95.9  7e-19  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_29030  carbohydrate ABC transporter membrane protein  25.97 
 
 
275 aa  95.9  7e-19  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3639  monosaccharide-transporting ATPase  28.17 
 
 
292 aa  95.9  8e-19  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
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