| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2125 |
|---|
| Symbol | |
|---|
| ID | 4811172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 2524000 |
|---|
| End bp | 2524911 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640107531 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001038524 |
|---|
| Protein GI | 125974614 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAGAGA AATTTGTGGA GCTGGCAAGA AAGATAAAAT TGAGGAAACG GATTTATAAA
CTTAAAAGGT TTGGCGTTTA TGTTATTTTG ATTGTAATTA CCGTGGTTTT ACTGTTTCCA
ATACTGTTTA CGATAGCAAA TTCCTTTATG TCCGATAAGG AAGTTTTGGA TACATATCAG
AAAAAGATAG AAGAAGTTGA AGAGGGAGAA AGTACCGAAT TTTTAGGGTT CAAGCTGATA
CCTGACATGG TGAGCATGAA ACAGTATTAC ACTGTTTTAT TCAGAAAGCC GACTTTCCTG
TTGATGTTTT TAAACTCTGC AATTATGACA ATTCCCATTG TTATCATCCA GGTGATAGTA
GGTGTGTTTG CGGCATACGC TTTTGCAAAG TTGCGGTTTC CGTTGAGGGA TAAGTTGTTC
TTTGTCTTTA TAGTGGTTAT GCTGATGCCT TTGCAGGTTA CCCTCGTTCC CAATTATATA
TTGTTAAGAA AACTTGATAT GATTGGTTCG TTTCTTTCAG TTATTCTGCC GGGAGGATTT
TCGGCCTTCG GCGTGGTGCT TTTAAGACAG TATATGAGGG GAATACCTGA TGAGTGCTGT
GAAGCGGCAA TGATTGACGG AGCGGGATAT CTTAAAACCT TTACAAAGAT TATTCTGCCC
CAGTGCAAGA GCATAATAGC TTCTCTTGCG ATTTTGGCTT TCATTGACAA CTGGAATATG
GTTGAACAGC CTTTGATATT CTTAAGCGAC AGTGCAAAAT ACCCTTTGTC CGTATACCTT
GCCTATATAA ATGAAGGGGA TCTTGGACTG GCGTTTGCAA GCGGAGTTCT TTACATGATT
CCGACGGTGT TGATATACCT TTACGGCGAA AAATACTTCG TGGAAGGTAT TCAGCTTACC
GGTATTAAGT AA
|
|---|
| Protein sequence | MKEKFVELAR KIKLRKRIYK LKRFGVYVIL IVITVVLLFP ILFTIANSFM SDKEVLDTYQ
KKIEEVEEGE STEFLGFKLI PDMVSMKQYY TVLFRKPTFL LMFLNSAIMT IPIVIIQVIV
GVFAAYAFAK LRFPLRDKLF FVFIVVMLMP LQVTLVPNYI LLRKLDMIGS FLSVILPGGF
SAFGVVLLRQ YMRGIPDECC EAAMIDGAGY LKTFTKIILP QCKSIIASLA ILAFIDNWNM
VEQPLIFLSD SAKYPLSVYL AYINEGDLGL AFASGVLYMI PTVLIYLYGE KYFVEGIQLT
GIK
|
|---|
| |