Gene Hmuk_3224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3224 
Symbol 
ID8409299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013201 
Strand
Start bp2413 
End bp3264 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content61% 
IMG OID645018160 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003175685 
Protein GI257372911 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGAAA AACTCGAAAA GGAGGCGCTG TGGCAGTTCG GCGGCTACGG ATTCCTCGTC 
GCCGTCACGA TGGTGATGAT GTTTCCCATC TACTGGCTCG TCGTCGCCTC GACGCTGCCG
CAGTCGGCGA TCTTCGCGGG CGGTGCGGGC GAACTGCCAC GGCTGATTCC GGGGACGAAC
TTCCTGGCGA ACGCCGAGGC GCTCGCCGCC CGTCCGGAAG TCGACTTCTA CCGGAGCATG
CTCAACAGTC TCGTGATCGC CGTCGTCTAC ACGGGCCTGG CGCTGCTGTT CTGTTCGATG
GGCGGGTTCG CACTGGCGAA GTACGACTTC AAGTACAAGC GGGCGCTGTT CATGGGGATT
CTGGGAACGC TGTTGCTCCC GACGAATCTG CTGGTGATCC CGCTGTTCTT GCTCGTCTCG
AACATGGGCC TGTCCAACAG CTACTGGGCC GTGATCCTCC CGTGGGCCGC GTATCCGCTG
GGGATCTTCT TCATGAAACA GGCGATGCAG TCGATCCCGG ACTCGCTGCT CGAAGCCGCA
CGGATGGACG GCGCGTCGGA GTTCCAACTG TACTACCGCG TCGTGCTCCC GTCGATGAAG
TCGTCGCTGG CCGCGCTGGC GGTGATCCTG TTTCTCTTCC AGTGGAACCT CTTCCTGTGG
CCCCTCGTAG TGTTGCGCGA AGGGAAGTAC ACGATCCCGG TGGCGATCTC GAAGATCATG
AGCAACGACA TGATCGCGTA CGACCAGCTG ATGGTCGCGT CCGCGATGGC GATCGTCCCG
ATGTTCGTGG TGTTCATCCT GCTCCAGCGC CACTTCGTAA ACGGTATACT CGGCGGAGCA
GTCAAGGAGT GA
 
Protein sequence
MHEKLEKEAL WQFGGYGFLV AVTMVMMFPI YWLVVASTLP QSAIFAGGAG ELPRLIPGTN 
FLANAEALAA RPEVDFYRSM LNSLVIAVVY TGLALLFCSM GGFALAKYDF KYKRALFMGI
LGTLLLPTNL LVIPLFLLVS NMGLSNSYWA VILPWAAYPL GIFFMKQAMQ SIPDSLLEAA
RMDGASEFQL YYRVVLPSMK SSLAALAVIL FLFQWNLFLW PLVVLREGKY TIPVAISKIM
SNDMIAYDQL MVASAMAIVP MFVVFILLQR HFVNGILGGA VKE