65 homologs were found in PanDaTox collection
for query gene Clim_0952 on replicon NC_010803
Organism: Chlorobium limicola DSM 245



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010803  Clim_0952  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  100 
 
 
381 aa  794    Chlorobium limicola DSM 245  Bacteria  normal  0.529831  n/a   
 
 
-
 
NC_011059  Paes_0603  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  68.5 
 
 
381 aa  566  1e-160  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.110275  normal 
 
 
-
 
NC_008639  Cpha266_0696  coenzyme F420 hydrogenase/dehydrogenase beta subunit  65.38 
 
 
352 aa  468  1.0000000000000001e-131  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_0188  coenzyme F420 hydrogenase/dehydrogenase beta subunit  45.05 
 
 
428 aa  353  2e-96  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_2739  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  45.05 
 
 
391 aa  353  2.9999999999999997e-96  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_1791  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  47.37 
 
 
416 aa  349  5e-95  Chlorobium limicola DSM 245  Bacteria  decreased coverage  0.000000000803312  n/a   
 
 
-
 
NC_007413  Ava_4214  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like  38.83 
 
 
397 aa  282  9e-75  Anabaena variabilis ATCC 29413  Bacteria  normal  0.14758  normal 
 
 
-
 
NC_013161  Cyan8802_1394  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  38.03 
 
 
401 aa  274  2.0000000000000002e-72  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_0742  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like  37.23 
 
 
401 aa  273  2.0000000000000002e-72  Trichodesmium erythraeum IMS101  Bacteria  decreased coverage  0.00706315  normal 
 
 
-
 
NC_011726  PCC8801_1364  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  38.03 
 
 
401 aa  274  2.0000000000000002e-72  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011729  PCC7424_0101  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  38.03 
 
 
397 aa  271  1e-71  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0353763 
 
 
-
 
NC_011884  Cyan7425_2254  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  38.13 
 
 
402 aa  268  1e-70  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_3552  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain-containing protein  37.77 
 
 
399 aa  268  2e-70  'Nostoc azollae' 0708  Bacteria  normal  0.935534  n/a   
 
 
-
 
NC_007604  Synpcc7942_1359  coenzyme F420 hydrogenase  37.5 
 
 
401 aa  266  5e-70  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_3479  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  38.03 
 
 
429 aa  233  3e-60  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009356  OSTLU_36251  predicted protein  33.95 
 
 
428 aa  205  1e-51  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.0805225  n/a   
 
 
-
 
NC_007925  RPC_1245  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like  30.1 
 
 
409 aa  196  7e-49  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.491733  unclonable  0.0000000241639 
 
 
-
 
NC_007778  RPB_4023  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like  31.12 
 
 
410 aa  195  1e-48  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.53217  normal 
 
 
-
 
NC_007958  RPD_3777  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like  30.05 
 
 
410 aa  192  6e-48  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0498224  normal  0.0688938 
 
 
-
 
NC_011004  Rpal_1688  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  29.84 
 
 
409 aa  187  2e-46  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_3268  putative coenzyme F420 hydrogenase  29.26 
 
 
409 aa  184  3e-45  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.96965 
 
 
-
 
NC_011671  PHATR_43972  predicted protein  29.49 
 
 
536 aa  179  4.999999999999999e-44  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.549222  n/a   
 
 
-
 
NC_007643  Rru_A0937  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like  28.99 
 
 
410 aa  172  1e-41  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_0300  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like  27.85 
 
 
412 aa  170  3e-41  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_1640  coenzyme F420 hydrogenase/dehydrogenase beta subunit  30.63 
 
 
419 aa  163  5.0000000000000005e-39  Halorhodospira halophila SL1  Bacteria  normal  0.326327  n/a   
 
 
-
 
NC_008553  Mthe_0174  coenzyme F420 hydrogenase/dehydrogenase beta subunit  27.03 
 
 
362 aa  92.4  1e-17  Methanosaeta thermophila PT  Archaea  normal  0.318509  n/a   
 
 
-
 
NC_009135  MmarC5_0646  coenzyme F420-reducing hydrogenase subunit beta  24.38 
 
 
282 aa  78.2  0.0000000000002  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A0255  F420H2 dehydrogenase subunit F  24.6 
 
 
346 aa  75.9  0.000000000001  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_009634  Mevan_0076  coenzyme F420-reducing hydrogenase subunit beta  22.73 
 
 
282 aa  71.6  0.00000000002  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A0449  coenzyme F420-reducing hydrogenase subunit beta  23.58 
 
 
291 aa  70.1  0.00000000006  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_009635  Maeo_1042  coenzyme F420-reducing hydrogenase subunit beta  26.03 
 
 
282 aa  69.7  0.00000000007  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A0881  coenzyme F420 hydrogenase, beta subunit  23.44 
 
 
387 aa  67.4  0.0000000004  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_009634  Mevan_0695  coenzyme F420-reducing hydrogenase subunit beta  23.08 
 
 
282 aa  66.6  0.0000000006  Methanococcus vannielii SB  Archaea  normal  0.507932  n/a   
 
 
-
 
NC_008942  Mlab_0012  coenzyme F420-reducing hydrogenase subunit beta  24.67 
 
 
290 aa  66.6  0.0000000007  Methanocorpusculum labreanum Z  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_2329  coenzyme F420-reducing hydrogenase subunit beta  23.62 
 
 
288 aa  65.9  0.000000001  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_009635  Maeo_1303  coenzyme F420 hydrogenase/dehydrogenase beta subunit  24.62 
 
 
357 aa  66.2  0.000000001  Methanococcus aeolicus Nankai-3  Archaea  normal  0.808254  n/a   
 
 
-
 
NC_011832  Mpal_0087  coenzyme F420-reducing hydrogenase subunit beta  23.25 
 
 
291 aa  65.1  0.000000002  Methanosphaerula palustris E1-9c  Archaea  normal  0.127818  normal  0.061617 
 
 
-
 
NC_007796  Mhun_0783  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like  25.82 
 
 
337 aa  65.1  0.000000002  Methanospirillum hungatei JF-1  Archaea  hitchhiker  0.00366682  normal  0.213871 
 
 
-
 
NC_009135  MmarC5_0193  coenzyme F420-reducing hydrogenase subunit beta  23.14 
 
 
282 aa  64.3  0.000000004  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0630  coenzyme F420-reducing hydrogenase subunit beta  22.73 
 
 
282 aa  63.2  0.000000007  Methanococcus maripaludis C7  Archaea  normal  normal  0.9157 
 
 
-
 
NC_009975  MmarC6_1288  coenzyme F420-reducing hydrogenase subunit beta  23.14 
 
 
282 aa  62.8  0.00000001  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A2290  coenzyme F420-reducing hydrogenase subunit beta  24.1 
 
 
291 aa  61.6  0.00000002  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.107219 
 
 
-
 
NC_009051  Memar_2177  coenzyme F420-reducing hydrogenase subunit beta  23.21 
 
 
298 aa  61.2  0.00000003  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_007955  Mbur_2371  F420H2 dehydrogenase subunit F  24.14 
 
 
343 aa  58.9  0.0000001  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_002936  DET0214  iron-sulfur cluster-binding protein/coenzyme F420-reducing hydrogenase, beta subunit, putative  22.69 
 
 
428 aa  57.8  0.0000003  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0139  coenzyme F420 hydrogenase/dehydrogenase beta subunit  22.48 
 
 
428 aa  57.8  0.0000003  Dehalococcoides sp. BAV1  Bacteria  normal  0.668002  n/a   
 
 
-
 
NC_009975  MmarC6_0866  coenzyme F420 hydrogenase/dehydrogenase beta subunit  23.14 
 
 
359 aa  55.1  0.000002  Methanococcus maripaludis C6  Archaea  normal  0.161905  n/a   
 
 
-
 
NC_009135  MmarC5_1595  coenzyme F420 hydrogenase/dehydrogenase beta subunit  22.9 
 
 
359 aa  55.5  0.000002  Methanococcus maripaludis C5  Archaea  normal  0.502541  n/a   
 
 
-
 
NC_009637  MmarC7_1081  coenzyme F420 hydrogenase/dehydrogenase beta subunit  22.22 
 
 
359 aa  55.1  0.000002  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_007955  Mbur_2261  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein  23.33 
 
 
389 aa  53.5  0.000006  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007955  Mbur_0619  nitrite and sulphite reductase  23.4 
 
 
639 aa  52.4  0.00001  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.00799056  n/a   
 
 
-
 
NC_009943  Dole_1150  coenzyme F420 hydrogenase/dehydrogenase beta subunit  24.59 
 
 
364 aa  51.6  0.00002  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009634  Mevan_1095  coenzyme F420 hydrogenase/dehydrogenase beta subunit  23.64 
 
 
358 aa  51.6  0.00002  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009635  Maeo_0778  nitrite and sulphite reductase 4Fe-4S region  20.41 
 
 
618 aa  51.2  0.00003  Methanococcus aeolicus Nankai-3  Archaea  normal  0.542223  n/a   
 
 
-
 
NC_013525  Tter_1334  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  21.48 
 
 
396 aa  51.2  0.00003  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011832  Mpal_2707  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  23.48 
 
 
341 aa  50.8  0.00003  Methanosphaerula palustris E1-9c  Archaea  normal  0.889848  normal  0.835032 
 
 
-
 
NC_009712  Mboo_0476  coenzyme F420-reducing hydrogenase subunit beta  20.7 
 
 
308 aa  49.7  0.00009  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.601068 
 
 
-
 
NC_013235  Namu_4481  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  21.63 
 
 
418 aa  49.3  0.0001  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0964  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein  21.65 
 
 
400 aa  48.9  0.0001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0907338  n/a   
 
 
-
 
NC_013158  Huta_0177  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  23.05 
 
 
424 aa  47  0.0005  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_009712  Mboo_1693  coenzyme F420 hydrogenase/dehydrogenase beta subunit  23.53 
 
 
340 aa  46.6  0.0008  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.884047  normal  0.69888 
 
 
-
 
NC_007355  Mbar_A0662  coenzyme F420 hydrogenase beta subunit  23.83 
 
 
344 aa  45.1  0.002  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.368347 
 
 
-
 
NC_013743  Htur_0242  Coenzyme F420 hydrogenase  21.48 
 
 
538 aa  43.5  0.006  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009135  MmarC5_1537  formate dehydrogenase, beta subunit (F420)  21.88 
 
 
375 aa  43.1  0.008  Methanococcus maripaludis C5  Archaea  normal  0.0761099  n/a   
 
 
-
 
NC_009051  Memar_0331  coenzyme F420 hydrogenase/dehydrogenase beta subunit  20.89 
 
 
339 aa  43.1  0.009  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>