Gene PCC7424_0101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_0101 
Symbol 
ID7107787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp115212 
End bp116405 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content45% 
IMG OID643478377 
Productcoenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein 
Protein accessionYP_002375439 
Protein GI218437110 
COG category[C] Energy production and conversion 
COG ID[COG1035] Coenzyme F420-reducing hydrogenase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.0353763 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCG TAGCACCGCA CAAAAAAGCT AAAGCCATTA AACCCGGTAG TCGTCGCCCT 
GCTAAAGAAC TCTGTAGCGA GTGCGGACTA TGCGATACTT ATTATATCCA CTATGTTAAA
GAAGCTTGTG CTTTCCTCAA TCAACAAGTG GCAGAACTCG AAGCTCAAGC TCACGGACGC
AGTAGAAATT TAGATCGTCA AGATGATTGG TATTTTGGTG TTCATCAGGA AATGATGGCA
GCGAAGAAAA AACAACCCAT CGAGGGGGCA CAATGGACGG GGATCGTTAG TACGATCGCC
TGTGAAATGT TAACCCGTGG CCTGGTGGAA GGGGTTGTCT GTGTGCAAAA TACCCCAGAA
GACCGTTTTC AACCGATGCC TATTTTAGCC ACGACTCCAG AAGAAATTTT AGCCGCCAAG
GTCAATAAAC CAACCCTTTC CCCTAATCTG TCGGTTTTAG AACAAATTGA ACAGTCAGGG
ATGAAACGGT TATTAGTGAT TGGAGTAGGA TGTCAAATTC AAGCTCTGCG GGCGGTTGAA
AAGGAATTAG GCTTAGAGAA GCTTTATGTA TTGGGGACTC CTTGCGTTGA TAATGTGACT
CGTGACGGGT TGCAAAAGTT CCTGGAAACC ACCAGTAAAT CTCCTGATAC GATCGTACAT
TATGAATTTA TGCAGGATTT TCGGGTACAT TTTAAACATG AGGATGGTTC AATTGAAACA
GTGCCCTTTT TTGGCTTAAA AACCAATCAG CTTAAAGATG TGTTTGCCCC TTCCTGTATG
AGTTGTTTTG ATTATGTCAA CTCTCTCGCT GACTTGGTAG TGGGGTATAT GGGTGCGCCT
TTTGGCTGGC AGTGGCTCGT CGTTCGCAAT GACACCGGGC GGGAAATGCT CGATCTGGTA
CGGGATCAAA TTGAGACTCA AGGGGTAATG TCTTCGGGCG ATCGTCGTCA AGCGGTACAG
CAGAGTATTC CGGCTTATGA TAAGGGGGTA ACGTTGCCGA TGTGGGCGGC GAAATTAATG
GGAGTAGTGA TAGAAAGAAT CGGGCCAAAA GGGTTAGAAT ATGCCCGTTT TTCCATTGAT
TCTCATTACA CTCGCAATTA TCTATATGTT AAGCGCAATT ATCCCGAAAA GTTAGAGGCT
CATGTCCCAG AGTATGCTAA ACGAATTGTA GGACAATATA AGTTACCGGA TTAA
 
Protein sequence
MTSVAPHKKA KAIKPGSRRP AKELCSECGL CDTYYIHYVK EACAFLNQQV AELEAQAHGR 
SRNLDRQDDW YFGVHQEMMA AKKKQPIEGA QWTGIVSTIA CEMLTRGLVE GVVCVQNTPE
DRFQPMPILA TTPEEILAAK VNKPTLSPNL SVLEQIEQSG MKRLLVIGVG CQIQALRAVE
KELGLEKLYV LGTPCVDNVT RDGLQKFLET TSKSPDTIVH YEFMQDFRVH FKHEDGSIET
VPFFGLKTNQ LKDVFAPSCM SCFDYVNSLA DLVVGYMGAP FGWQWLVVRN DTGREMLDLV
RDQIETQGVM SSGDRRQAVQ QSIPAYDKGV TLPMWAAKLM GVVIERIGPK GLEYARFSID
SHYTRNYLYV KRNYPEKLEA HVPEYAKRIV GQYKLPD