Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_0101 |
Symbol | |
ID | 7107787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 115212 |
End bp | 116405 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643478377 |
Product | coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein |
Protein accession | YP_002375439 |
Protein GI | 218437110 |
COG category | [C] Energy production and conversion |
COG ID | [COG1035] Coenzyme F420-reducing hydrogenase, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.0353763 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCCG TAGCACCGCA CAAAAAAGCT AAAGCCATTA AACCCGGTAG TCGTCGCCCT GCTAAAGAAC TCTGTAGCGA GTGCGGACTA TGCGATACTT ATTATATCCA CTATGTTAAA GAAGCTTGTG CTTTCCTCAA TCAACAAGTG GCAGAACTCG AAGCTCAAGC TCACGGACGC AGTAGAAATT TAGATCGTCA AGATGATTGG TATTTTGGTG TTCATCAGGA AATGATGGCA GCGAAGAAAA AACAACCCAT CGAGGGGGCA CAATGGACGG GGATCGTTAG TACGATCGCC TGTGAAATGT TAACCCGTGG CCTGGTGGAA GGGGTTGTCT GTGTGCAAAA TACCCCAGAA GACCGTTTTC AACCGATGCC TATTTTAGCC ACGACTCCAG AAGAAATTTT AGCCGCCAAG GTCAATAAAC CAACCCTTTC CCCTAATCTG TCGGTTTTAG AACAAATTGA ACAGTCAGGG ATGAAACGGT TATTAGTGAT TGGAGTAGGA TGTCAAATTC AAGCTCTGCG GGCGGTTGAA AAGGAATTAG GCTTAGAGAA GCTTTATGTA TTGGGGACTC CTTGCGTTGA TAATGTGACT CGTGACGGGT TGCAAAAGTT CCTGGAAACC ACCAGTAAAT CTCCTGATAC GATCGTACAT TATGAATTTA TGCAGGATTT TCGGGTACAT TTTAAACATG AGGATGGTTC AATTGAAACA GTGCCCTTTT TTGGCTTAAA AACCAATCAG CTTAAAGATG TGTTTGCCCC TTCCTGTATG AGTTGTTTTG ATTATGTCAA CTCTCTCGCT GACTTGGTAG TGGGGTATAT GGGTGCGCCT TTTGGCTGGC AGTGGCTCGT CGTTCGCAAT GACACCGGGC GGGAAATGCT CGATCTGGTA CGGGATCAAA TTGAGACTCA AGGGGTAATG TCTTCGGGCG ATCGTCGTCA AGCGGTACAG CAGAGTATTC CGGCTTATGA TAAGGGGGTA ACGTTGCCGA TGTGGGCGGC GAAATTAATG GGAGTAGTGA TAGAAAGAAT CGGGCCAAAA GGGTTAGAAT ATGCCCGTTT TTCCATTGAT TCTCATTACA CTCGCAATTA TCTATATGTT AAGCGCAATT ATCCCGAAAA GTTAGAGGCT CATGTCCCAG AGTATGCTAA ACGAATTGTA GGACAATATA AGTTACCGGA TTAA
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Protein sequence | MTSVAPHKKA KAIKPGSRRP AKELCSECGL CDTYYIHYVK EACAFLNQQV AELEAQAHGR SRNLDRQDDW YFGVHQEMMA AKKKQPIEGA QWTGIVSTIA CEMLTRGLVE GVVCVQNTPE DRFQPMPILA TTPEEILAAK VNKPTLSPNL SVLEQIEQSG MKRLLVIGVG CQIQALRAVE KELGLEKLYV LGTPCVDNVT RDGLQKFLET TSKSPDTIVH YEFMQDFRVH FKHEDGSIET VPFFGLKTNQ LKDVFAPSCM SCFDYVNSLA DLVVGYMGAP FGWQWLVVRN DTGREMLDLV RDQIETQGVM SSGDRRQAVQ QSIPAYDKGV TLPMWAAKLM GVVIERIGPK GLEYARFSID SHYTRNYLYV KRNYPEKLEA HVPEYAKRIV GQYKLPD
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