Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4023 |
Symbol | |
ID | 3911830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 4590911 |
End bp | 4592143 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637885927 |
Product | coenzyme F420 hydrogenase/dehydrogenase beta subunit-like |
Protein accession | YP_487627 |
Protein GI | 86751131 |
COG category | [C] Energy production and conversion |
COG ID | [COG1035] Coenzyme F420-reducing hydrogenase, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.53217 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGAGC AGAGCGGAAC CACGGCGCCG GTGTGGTCGC CGGCGCTGAA CGATCCCGCG CCGCGCGAGC TGTGCACCGA TTGCGGCGTG TCGCGGATGA GCGATCCGAA GCAATGCGGA CAGGCCTGCC AGTTCATCAA GCCGGACTAT CCGGCGATGG AACTCCAGGT GCACGGACGC AACCGCGATC CGTCGAAGCC GGATGAGGCC TTCTTCGGCC CGCACCGGCG GATGCTGCAG GCTGCGATGA AGCAGCCGCG TGAGGGCGCG CAATGGACCG GGATCACCAC GCGGATCGCT GAACGCCTCC TCGAAACCGG CGCGGTCGAT GCCGTGCTGA CGATGGCGCC GGACCCGGCC GACAAATGGA AGCCGATGCC GGTGCTGGTG ACCAGCCCCG AGGGCATGGC GCAGTGCCGC GGGATGCGGA TGGGCTATGC GCCGTCGCTG GCGCTGCTGG AGCCCGCGCG CGCCGCCGGC TACAAGCGGA TCGCGGTGAT CGGCATTCCA TGCCAGGTCT ATGCGCTGCG CTCGCTGGAG CGGAAGCTCG GCTTCGAGCG GCTGTATGTG ATCGGCACGC CGTGCTCGGA CAACACCACG ACCGAAAATT TCCACGAGTT CCTCGATCTG TTGTCGGACC GACCCGAGAC CATCACCTAT CTGGAATTCC GCGCCGACTA TCATGTCGAG CTTCGCTTCA CCGACGGCCG GGTGCAGGCG ATTCCGTTCC TGTTGTTGCC GATCTCGAAA CTGAAGCCGG ACTTCTTCCC GATCACCTGC CGCACCTGCG TCGACTACAC CAATACGCTG GCCGACATCA CCGTCGGCTA CATGGCCGGC CGCGGCGAGC AATGGCTGCT GGTGCGCAAC CAGCGCGGCG AGGAACTGCT CGACCTGCTC GGCGACGAAG TGCGGCTGAG CGAGCCGACC AGCGCGGGGA ACCGCACCGC GCCGGTGAAA GGCTTCCTGA AGAACACCGA GCTCGCCGCC GGCGGCCTGC CGGTGCGCGG GATGCCGAAC TGGCTGCGGC CGTTCATGGG CTGGCTGATG CCGAAGGTCG GCCCGCGCGG GCTCGAATTC GGCCGCGCCC GGGTCGAGAT GAAGGCGGTC GAAACCGTGC TGCATCTGCG CCGAAACTAC AAACAGAAGA TCAAGAACAT GGTACCGGCG CACGTCTGGG CGCTGGTCAA ACCCTACGGG CTCGAGCCCG ACGACTCCGA GCGGCGCAAC TAA
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Protein sequence | MVEQSGTTAP VWSPALNDPA PRELCTDCGV SRMSDPKQCG QACQFIKPDY PAMELQVHGR NRDPSKPDEA FFGPHRRMLQ AAMKQPREGA QWTGITTRIA ERLLETGAVD AVLTMAPDPA DKWKPMPVLV TSPEGMAQCR GMRMGYAPSL ALLEPARAAG YKRIAVIGIP CQVYALRSLE RKLGFERLYV IGTPCSDNTT TENFHEFLDL LSDRPETITY LEFRADYHVE LRFTDGRVQA IPFLLLPISK LKPDFFPITC RTCVDYTNTL ADITVGYMAG RGEQWLLVRN QRGEELLDLL GDEVRLSEPT SAGNRTAPVK GFLKNTELAA GGLPVRGMPN WLRPFMGWLM PKVGPRGLEF GRARVEMKAV ETVLHLRRNY KQKIKNMVPA HVWALVKPYG LEPDDSERRN
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