Gene Ava_4214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4214 
Symbol 
ID3680958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5284487 
End bp5285680 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content46% 
IMG OID637719561 
Productcoenzyme F420 hydrogenase/dehydrogenase beta subunit-like 
Protein accessionYP_324708 
Protein GI75910412 
COG category[C] Energy production and conversion 
COG ID[COG1035] Coenzyme F420-reducing hydrogenase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.14758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCGC TCTTCCCTCA CAAAAAAGCC AAAGCCTTAA AACCCAATAG CCGTCGCCCT 
GCTAAGGAAC TATGCAGCGA GTGCGGGCTG TGCGATACAT ATTATATCCA CTATGTCAAG
GAAGCCTGTG CTTTTATTAC CCAGCAGATA GACACACTCG AAGAACAGGC ACACCAGCGA
TCGCGCAATC TCGATCATCC TGATGAACTC TACTTTGGTG TTCATCAAGA CATGATTGCA
GCCAGGAAAC AGCAACCAAT TCCAGGCGCA CAATGGACTG GTATTGTCAG CAGTATTGCC
ATAGAAATGC TGAATCGTGG CCTAGTGGAA GGCGTTGTCT GCGTCCAAAA CAGCAAAGAA
GATCGCTTCC AACCCATGCC CGTAATTGCT CGCACCCCAG AAGAAATACT AGCAGCGCGG
GTAAACAAAC CAACACTCTC CCCCAATCTA TCAATATTGG AACAAGTAGA AAAATCAGGG
ATGAAGCGAC TGTTAGTCAT TGGTGTTGGT TGCCAAATCC AAGCCTTACG AGCTGTAGAA
AAAAAATTGG GTTTAGAAAA GCTCTACGTT TTAGGTACAC CTTGTGTAGA TAACGTCACC
CGCGCCGGAC TGCAAAAATT CTTAGAAACC ACCAGTCGCT CCCCTCAGAC AGTTGTACAC
TATGAGTTCA TGCAGGATTT CCGCATTCAC TTCACACATG AAGATGGCTC AATTGAGAAA
GTCCCCTTCT TTGGTTTAAA AACGAATCAA CTCAAAGATG TTTTTGCTCC TTCCTGCATG
AGTTGTTTTG ATTACGTCAA CTCCCTAGCC GATTTAGTAG TGGGTTACAT GGGCGCACCC
TTCGGCTGGC AGTGGATTCT TGTCAGAAAT AATACAGGTA AAGAAATGCT GGACTTGGTG
CAAGACCAGT TAGATACTCA ACCTGTAATG TCCCAAGGCA ATCGACAAGA GGCTGTACAA
CAGGGAATAT CCGCCTATGA CAAAGGTGTG ACACTTCCCA TGTGGGTGGC AAAAATGATG
GGTGTGGTGA TTGATAAAAT TGGCCCTAAA GGGTTAGAGT ATGCGCGGTT CTCCATAGAT
TCCCACTTTA CCCGCAATTA TTTGTTTGTA AAGCGGAATC ATCCTGAGAA GTTGGAGGCG
CACGTTCCTG AGTTTGCCAA GCGCATCGTG GGGCAGTATA AGTTACCAGA GTGA
 
Protein sequence
MTSLFPHKKA KALKPNSRRP AKELCSECGL CDTYYIHYVK EACAFITQQI DTLEEQAHQR 
SRNLDHPDEL YFGVHQDMIA ARKQQPIPGA QWTGIVSSIA IEMLNRGLVE GVVCVQNSKE
DRFQPMPVIA RTPEEILAAR VNKPTLSPNL SILEQVEKSG MKRLLVIGVG CQIQALRAVE
KKLGLEKLYV LGTPCVDNVT RAGLQKFLET TSRSPQTVVH YEFMQDFRIH FTHEDGSIEK
VPFFGLKTNQ LKDVFAPSCM SCFDYVNSLA DLVVGYMGAP FGWQWILVRN NTGKEMLDLV
QDQLDTQPVM SQGNRQEAVQ QGISAYDKGV TLPMWVAKMM GVVIDKIGPK GLEYARFSID
SHFTRNYLFV KRNHPEKLEA HVPEFAKRIV GQYKLPE