Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4214 |
Symbol | |
ID | 3680958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5284487 |
End bp | 5285680 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637719561 |
Product | coenzyme F420 hydrogenase/dehydrogenase beta subunit-like |
Protein accession | YP_324708 |
Protein GI | 75910412 |
COG category | [C] Energy production and conversion |
COG ID | [COG1035] Coenzyme F420-reducing hydrogenase, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.14758 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCGC TCTTCCCTCA CAAAAAAGCC AAAGCCTTAA AACCCAATAG CCGTCGCCCT GCTAAGGAAC TATGCAGCGA GTGCGGGCTG TGCGATACAT ATTATATCCA CTATGTCAAG GAAGCCTGTG CTTTTATTAC CCAGCAGATA GACACACTCG AAGAACAGGC ACACCAGCGA TCGCGCAATC TCGATCATCC TGATGAACTC TACTTTGGTG TTCATCAAGA CATGATTGCA GCCAGGAAAC AGCAACCAAT TCCAGGCGCA CAATGGACTG GTATTGTCAG CAGTATTGCC ATAGAAATGC TGAATCGTGG CCTAGTGGAA GGCGTTGTCT GCGTCCAAAA CAGCAAAGAA GATCGCTTCC AACCCATGCC CGTAATTGCT CGCACCCCAG AAGAAATACT AGCAGCGCGG GTAAACAAAC CAACACTCTC CCCCAATCTA TCAATATTGG AACAAGTAGA AAAATCAGGG ATGAAGCGAC TGTTAGTCAT TGGTGTTGGT TGCCAAATCC AAGCCTTACG AGCTGTAGAA AAAAAATTGG GTTTAGAAAA GCTCTACGTT TTAGGTACAC CTTGTGTAGA TAACGTCACC CGCGCCGGAC TGCAAAAATT CTTAGAAACC ACCAGTCGCT CCCCTCAGAC AGTTGTACAC TATGAGTTCA TGCAGGATTT CCGCATTCAC TTCACACATG AAGATGGCTC AATTGAGAAA GTCCCCTTCT TTGGTTTAAA AACGAATCAA CTCAAAGATG TTTTTGCTCC TTCCTGCATG AGTTGTTTTG ATTACGTCAA CTCCCTAGCC GATTTAGTAG TGGGTTACAT GGGCGCACCC TTCGGCTGGC AGTGGATTCT TGTCAGAAAT AATACAGGTA AAGAAATGCT GGACTTGGTG CAAGACCAGT TAGATACTCA ACCTGTAATG TCCCAAGGCA ATCGACAAGA GGCTGTACAA CAGGGAATAT CCGCCTATGA CAAAGGTGTG ACACTTCCCA TGTGGGTGGC AAAAATGATG GGTGTGGTGA TTGATAAAAT TGGCCCTAAA GGGTTAGAGT ATGCGCGGTT CTCCATAGAT TCCCACTTTA CCCGCAATTA TTTGTTTGTA AAGCGGAATC ATCCTGAGAA GTTGGAGGCG CACGTTCCTG AGTTTGCCAA GCGCATCGTG GGGCAGTATA AGTTACCAGA GTGA
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Protein sequence | MTSLFPHKKA KALKPNSRRP AKELCSECGL CDTYYIHYVK EACAFITQQI DTLEEQAHQR SRNLDHPDEL YFGVHQDMIA ARKQQPIPGA QWTGIVSSIA IEMLNRGLVE GVVCVQNSKE DRFQPMPVIA RTPEEILAAR VNKPTLSPNL SILEQVEKSG MKRLLVIGVG CQIQALRAVE KKLGLEKLYV LGTPCVDNVT RAGLQKFLET TSRSPQTVVH YEFMQDFRIH FTHEDGSIEK VPFFGLKTNQ LKDVFAPSCM SCFDYVNSLA DLVVGYMGAP FGWQWILVRN NTGKEMLDLV QDQLDTQPVM SQGNRQEAVQ QGISAYDKGV TLPMWVAKMM GVVIDKIGPK GLEYARFSID SHFTRNYLFV KRNHPEKLEA HVPEFAKRIV GQYKLPE
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